Factsheet for HORVU1Hr1G045310.7

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G061870.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64813.1	HORVU3Hr1G061870.1	AT3G58630.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G166300.1	Wheat	cytosol	97.03	97.03
TraesCS1B01G205000.1	Wheat	cytosol	96.14	96.14
EER91775	Sorghum	cytosol	82.49	82.01
Os10t0135200-01	Rice	cytosol	83.38	81.92
TraesCS1A01G172300.2	Wheat	cytosol	89.32	80.05
GSMUA_Achr10P...	Banana	cytosol	66.17	66.77
Solyc04g051700.2.1	Tomato	cytosol	64.69	65.47
PGSC0003DMT400080131	Potato	cytosol	64.69	65.27
GSMUA_Achr2P16850_001	Banana	cytosol	64.69	64.69
KRH43322	Soybean	cytosol	63.5	64.26
KRH59455	Soybean	cytosol	63.5	63.69
HORVU4Hr1G063900.7	Barley	cytosol	69.14	63.32
VIT_07s0031g01700.t01	Wine grape	cytosol	62.02	62.2
AT5G64813.1	Thale cress	cytosol	62.61	61.7
CDY18693	Canola	cytosol	62.61	61.7
Bra037797.1-P	Field mustard	cytosol	62.61	61.7
GSMUA_Achr6P00810_001	Banana	cytosol	61.72	61.54
VIT_18s0001g02170.t01	Wine grape	cytosol	61.13	61.49
CDX81260	Canola	cytosol	61.72	60.82
AT5G09910.1	Thale cress	cytosol	59.94	60.66
Zm00001d014330_P014	Maize	plastid	74.78	58.33
CDY14513	Canola	plasma membrane	63.5	57.99
CDY08848	Canola	cytosol	63.5	57.53
Bra024329.1-P	Field mustard	cytosol	63.5	57.37
KRH04620	Soybean	extracellular	12.17	38.32

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287FDG1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003924	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	EnsemblPlantsGene:HORVU1Hr1G045310	EnsemblPlants:HORVU1Hr1G045310.7
InterPro:P-loop_NTPase	PFAM:PF00071	PRINTS:PR00449	ScanProsite:PS00675	PFscan:PS51419	PANTHER:PTHR24073
PANTHER:PTHR24073:SF492	SMART:SM00173	SMART:SM00175	SUPFAM:SSF52540	InterPro:Sigma_54_int_dom_ATP-bd_1	InterPro:Small_GTP-bd_dom
InterPro:Small_GTPase	TIGRFAMs:TIGR00231	UniParc:UPI000B48957B	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr1H:+:329355603..329363913

Molecular Weight (calculated)

36955.7 Da

IEP (calculated)

9.747

GRAVY (calculated)

-0.393

Length

337 amino acids

Sequence
(BLAST)

001: MRFWRDGGAS ASGRDLNGGM PYGQVRVLIV GDSGVGKSSL AHLILQGSAI ARPTQTIGCT VDVKHITYGG LGSSSNSIIG DAERNFFVEL WDVSGHDRYR
101: DCRSLFYSQI NGVIFVYDLS QRKTKTNLSK WAVEVAESGT FSAPLGSGGP GGLPVPYLVI ANKVDIAPRD GRRVSSGNLI DVARQWVDKQ GLLPSNEELP
201: LVDSFPGNSG LLTAAKEARY DKEAVVKFFR MLIRRRYFSN ELPAPSPWSL TPRGDTILPV ETTNDEELFK RKSYGGQRYK YNGVAPLSAQ QNVTLPLSPS
301: PQQPMSSSAE NYRYHRFSSS AIPDKNSSRT SRLDINL

Best Arabidopsis Sequence Match ( AT5G64813.1 )
(BLAST)

001: MKFWRERERE NKEQILAPLC GQVRVLVVGD SGVGKTSLVH LINKGSSIVR PPQTIGCTVG VKHITYGSPA SSSSSIQGDS ERDFFVELWD VSGHERYKDC
101: RSLFYSQING VIFVHDLSQR RTKTSLQKWA SEVAATGTFS APLPSGGPGG LPVPYIVVGN KADIAAKEGT KGSSGNLVDA ARHWVEKQGL LPSSSEDLPL
201: FESFPGNGGL IAAAKETRYD KEALNKFFRM LIRRRYFSDE LPAASPWSIS PVPTSSSQRL DEITSDDDQF YKRTSFHGDP YKYNNTIPPL PAQRNLTPPP
301: TLYPQQPVST PDNYTIPRYS LSSVQETTNN GSARSKRMDI NV

Arabidopsis Description

LIP1Small GTPase LIP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.