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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G166300.1 Wheat cytosol 81.65 91.1
TraesCS1B01G205000.1 Wheat cytosol 80.32 89.61
HORVU1Hr1G045310.7 Barley cytosol 80.05 89.32
EER91775 Sorghum cytosol 70.74 78.47
Os10t0135200-01 Rice cytosol 71.01 77.84
TraesCS4A01G071800.1 Wheat cytosol, plastid 59.04 65.49
GSMUA_Achr10P... Banana cytosol 56.91 64.07
GSMUA_Achr2P16850_001 Banana cytosol 56.38 62.91
Solyc04g051700.2.1 Tomato cytosol 55.59 62.76
PGSC0003DMT400080131 Potato cytosol 55.59 62.57
KRH43322 Soybean cytosol 54.26 61.26
KRH59455 Soybean cytosol 54.26 60.71
Bra037797.1-P Field mustard cytosol 55.05 60.53
CDY18693 Canola cytosol 55.05 60.53
AT5G64813.1 Thale cress cytosol 54.79 60.23
CDX81260 Canola cytosol 54.26 59.65
VIT_07s0031g01700.t01 Wine grape cytosol 53.19 59.52
Zm00001d014330_P014 Maize plastid 68.09 59.26
VIT_18s0001g02170.t01 Wine grape cytosol 52.66 59.1
GSMUA_Achr6P00810_001 Banana cytosol 52.93 58.88
AT5G09910.1 Thale cress cytosol 52.13 58.86
CDY14513 Canola plasma membrane 55.85 56.91
Bra024329.1-P Field mustard cytosol 55.85 56.3
CDY08848 Canola cytosol 55.59 56.18
KRH04620 Soybean extracellular 10.64 37.38
Protein Annotations
EnsemblPlants:TraesCS1A01G172300.2EnsemblPlantsGene:TraesCS1A01G172300Gene3D:3.40.50.300GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0003924GO:GO:0005488GO:GO:0005525GO:GO:0016787InterPro:P-loop_NTPaseInterPro:Small_GTPase
PANTHER:PTHR24073PANTHER:PTHR24073:SF492PFAM:PF00071PFscan:PS51419SEG:segSMART:SM00175
SUPFAM:SSF52540MapMan:35.1::::
Description
No Description!
Coordinates
chr1A:+:308206107..308210789
Molecular Weight (calculated)
41270.0 Da
IEP (calculated)
9.746
GRAVY (calculated)
-0.391
Length
376 amino acids
Sequence
(BLAST)
001: MLDMEVDLQA LGELVGALQR VSMATSYTLE AKCPSGTPWH LAHPSRLPGP TQLRVPSCLQ RTCSRSTKTR APGVGKSSLA RLILQGSAVA RPTQTIGCTV
101: DVKHITYGSP GSSSNSIVGD AERNFFVELW DVSGHDRYRD CRSLFYSQIN GVIFVYDLSQ RKTKTNLSKW AVEVAESGTF SAPLGSGGPG GLPVPYLVIA
201: NKVDIAPRDG RRVSSGNLID VARQWVDKQG LLPSSEELPL VDSFPGNSGL LTAAKEARYD KEAVVKFFRM LIRRRYFSNE LPAPSPWSLT PRGDTILPVE
301: TTNDEELFKR KSYGGQRYKY NGVAPLSAQQ NVTLPLTPSP QQPMSSSAEN YRYHRFSSSA IPDKNSSRTS RLDINL
Best Arabidopsis Sequence Match ( AT5G09910.1 )
(BLAST)
001: MRFWRERGRE NKEHMVAPLC GQIRVLVVGD SGVGKSSLVH LIVKGSSIVR PSQTIGCTVG VKHLTYASPA SSSSIIKGDS ERDFFVELWD VSGHERYKDC
101: RSLFYSQING VIFVHDLSQR TTKTNLQKWA GEVSVTGEFS APLSSGGPGG LPVPYIVIGN KADIAAKGGT NGSSGNLVDA ARHWVEKQGL LPHSDELPLS
201: ESFPSNVGLI MAAKEARYDK EALTKIFHML IRRRYFSDEL PSPSSAWSLS HAPSQRLDEG TSDEDQFYKR TSLREGDAYK YNTLPQHNLM QSPTLYPQQP
301: PDRYNYAIPR FSLSSVEETS NGNGRSKRMD INV
Arabidopsis Description
LIP2Small GTPase-like protein LIP2 [Source:UniProtKB/Swiss-Prot;Acc:F4KFD8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.