Factsheet for HORVU7Hr1G084210.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0602400-01	Rice	nucleus, plasma membrane	60.33	76.03
TraesCS7A01G374000.1	Wheat	nucleus	87.38	75.39
OQU76674	Sorghum	cytosol	68.2	73.37
Zm00001d036897_P001	Maize	extracellular	66.23	65.8
HORVU4Hr1G031280.1	Barley	cytosol, plastid	47.38	48.09
KRH20283	Soybean	plastid	46.07	47.95
VIT_11s0016g05090.t01	Wine grape	cytosol	47.87	47.63
KRH03709	Soybean	plastid	46.89	46.89
HORVU5Hr1G109340.2	Barley	plastid	50.33	46.37
HORVU1Hr1G083090.1	Barley	cytosol	16.72	40.64
GSMUA_Achr5P06030_001	Banana	nucleus	46.72	39.64
HORVU3Hr1G031710.1	Barley	mitochondrion	16.39	38.31
HORVU3Hr1G018850.7	Barley	cytosol	30.98	34.55
HORVU5Hr1G037290.3	Barley	nucleus	28.85	33.21
HORVU3Hr1G092600.1	Barley	cytosol	30.0	31.88
HORVU3Hr1G092610.1	Barley	cytosol	30.0	31.88
HORVU5Hr1G048040.1	Barley	plastid	27.7	29.55
HORVU1Hr1G091050.3	Barley	nucleus	27.7	28.26
HORVU3Hr1G024610.13	Barley	cytosol, plastid	32.62	28.15
HORVU3Hr1G022710.1	Barley	mitochondrion	28.52	27.27
HORVU5Hr1G044620.1	Barley	cytosol, mitochondrion	15.57	25.0
HORVU6Hr1G080730.2	Barley	cytosol	12.79	23.85
HORVU4Hr1G007110.17	Barley	mitochondrion	29.84	23.64
HORVU4Hr1G053550.2	Barley	mitochondrion	29.67	22.8
HORVU2Hr1G025790.1	Barley	nucleus	28.52	17.08
HORVU0Hr1G020490.1	Barley	nucleus	28.69	16.42
HORVU3Hr1G018170.3	Barley	cytosol	34.75	15.34

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287X4X3	InterPro:DEAD/DEAH_box_helicase_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0003676	GO:GO:0003824	GO:GO:0004386	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787
EnsemblPlantsGene:HORVU7Hr1G084210	EnsemblPlants:HORVU7Hr1G084210.1	InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001
InterPro:IPR014014	InterPro:P-loop_NTPase	PFAM:PF00270	PFAM:PF00271	ScanProsite:PS00039	PFscan:PS51192
PFscan:PS51194	PFscan:PS51195	PANTHER:PTHR24031	PANTHER:PTHR24031:SF556	InterPro:RNA-helicase_DEAD-box_CS	InterPro:RNA_helicase_DEAD_Q_motif
SMART:SM00487	SMART:SM00490	SUPFAM:SSF52540	UniParc:UPI000B489364	SEG:seg	:

Description

No Description!

Coordinates

chrchr7H:+:506806997..506812913

Molecular Weight (calculated)

60325.7 Da

IEP (calculated)

7.180

GRAVY (calculated)

-0.433

Length

610 amino acids

Sequence
(BLAST)

001: WIDDAAGGEW TTVTRSGRXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXG LDVEGAARTG RLDKYDIPVE VSGDGAPAPA DGFDGSGLAE
101: AVLRNVARCG YDNPTPVQRY SIPIVLSGRD LMACAQTGSG KTAAFCLPVV SGLVAAEEGP GGGGGRGGRD AYDYDYGRAG RPRALVLAPT RELAAQINDE
201: AKKFAHKTGL NVKVAYGGTS MGQQLRDIEK GVDILVATPG RLVDMIERGK ISLEAIKYLI MDEADRMLDM GFEPQIRKIV DGMGMPRKSV RQTMLFSATF
301: PPEIQRLASD FLSKYIFITV GRVGSSTDLI TQQVEFVTHD EKRTYLIDLL QKQSFSSSDG KPQQPLTLVF VETKREADSL RYWLYNKGFP ATAIHGDRTQ
401: EERESALRSF KSGLTPIMVA TDVVARGLDV PNVAHVINYD LPKSIEDYVH RIGRTGRAGN AGSATAFFTE SNHPIAKGLL ELMTEAKQNV PTWLEDYAGK
501: PCYGGSSFGG RGRRSNGDGG SSFGGRDYRG GGDYSGDRYS GGGGGDRYSG GGGGDSNSGG GKSYSGGGGG GGGSGRYSSG GGSSRASDPP PRYYPSHPMG
601: TSNISASGWE

Best Arabidopsis Sequence Match ( AT2G42520.1 )
(BLAST)

001: MSASWADVAD SENTGSGSSN QNSHPSRPAY VPPHLRNRPA ASEPVAPLPA NDRVGYGGPP SGSRWAPGGS GVGVGGGGGY RADAGRPGSG SGYGGRGGGG
101: WNNRSGGWDR REREVNPFEN DDSEPEPAFT EQDNTVINFD AYEDIPIETS GDNVPPPVNT FAEIDLGEAL NLNIRRCKYV KPTPVQRHAI PILLEGRDLM
201: ACAQTGSGKT AAFCFPIISG IMKDQHVQRP RGSRTVYPLA VILSPTRELA SQIHDEAKKF SYQTGVKVVV AYGGTPINQQ LRELERGVDI LVATPGRLND
301: LLERARVSMQ MIRFLALDEA DRMLDMGFEP QIRKIVEQMD MPPRGVRQTL LFSATFPREI QRLAADFLAN YIFLAVGRVG SSTDLIVQRV EFVLDSDKRS
401: HLMDLLHAQR ENGIQGKQAL TLVFVETKRG ADSLENWLCI NGFPATSIHG DRTQQEREVA LKAFKSGRTP ILVATDVAAR GLDIPHVAHV VNFDLPNDID
501: DYVHRIGRTG RAGKSGLATA FFNDGNTSLA RPLAELMQEA NQEVPEWLTR YASRSSFGGG KNRRSGGRFG GRDFRREGSF GSGRGGYGGG GGGYGGGGGY
601: GGGGGYGGGG GYGGGYGGAS SGGYGGEPPS AWD

Arabidopsis Description

RH37DEAD-box ATP-dependent RNA helicase 37 [Source:UniProtKB/Swiss-Prot;Acc:Q84W89]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.