CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20283	Soybean	plastid	85.57	89.08
KRG97325	Soybean	endoplasmic reticulum	56.89	58.71
VIT_11s0016g05090.t01	Wine grape	cytosol	58.52	58.24
KRH58901	Soybean	nucleus	57.87	57.49
KRH42811	Soybean	endoplasmic reticulum	58.2	57.35
KRH31589	Soybean	nucleus	56.72	57.28
KRH38030	Soybean	endoplasmic reticulum	57.05	56.96
KRH71800	Soybean	plastid	56.23	56.14
Os06t0602400-01	Rice	nucleus, plasma membrane	43.61	54.96
OQU76674	Sorghum	cytosol	47.7	51.32
Zm00001d036897_P001	Maize	extracellular	48.52	48.21
HORVU7Hr1G084210.1	Barley	cytosol	46.89	46.89
TraesCS7A01G374000.1	Wheat	nucleus	48.52	41.87
GSMUA_Achr5P06030_001	Banana	nucleus	49.34	41.86
KRH47127	Soybean	nucleus	28.52	34.32
KRH44155	Soybean	cytosol	28.36	34.12
KRH48684	Soybean	cytosol, endoplasmic reticulum	25.74	32.98
KRH03228	Soybean	nucleus	31.31	31.73
KRH30661	Soybean	endoplasmic reticulum	29.34	31.68
KRG98124	Soybean	endoplasmic reticulum	29.51	31.52
KRH57127	Soybean	endoplasmic reticulum, nucleus	31.31	31.21
KRH39630	Soybean	nucleus	26.56	30.17
KRH74291	Soybean	nucleus	26.39	29.98
KRG94409	Soybean	cytosol	27.87	28.91
KRH68534	Soybean	cytosol	27.7	28.79
KRH56577	Soybean	nucleus	33.44	26.32
KRG93254	Soybean	endoplasmic reticulum	33.44	26.29
KRG96540	Soybean	cytosol, mitochondrion	30.98	24.61
KRH51212	Soybean	nucleus	27.87	24.25
KRH68277	Soybean	nucleus	30.98	24.17
KRH01937	Soybean	nucleus	27.87	24.08
KRH36905	Soybean	nucleus	32.79	17.17
KRH11875	Soybean	endoplasmic reticulum	32.79	16.65
KRH27757	Soybean	nucleus	29.02	15.99
KRH77709	Soybean	nucleus	28.69	15.85

Protein Annotations

EntrezGene:100791226	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R4J5P6	EMBL:ACUP02010358	InterPro:DEAD/DEAH_box_helicase_dom
EnsemblPlantsGene:GLYMA_17G115700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0005488	GO:GO:0005524
InterPro:Helicase_ATP-bd	InterPro:Helicase_C	InterPro:IPR001650	InterPro:IPR014001	InterPro:IPR014014	EnsemblPlants:KRH03709
ProteinID:KRH03709	ProteinID:KRH03709.1	InterPro:P-loop_NTPase	PFAM:PF00270	PFAM:PF00271	PFscan:PS51192
PFscan:PS51194	PFscan:PS51195	PANTHER:PTHR24031	PANTHER:PTHR24031:SF363	InterPro:RNA_helicase_DEAD_Q_motif	SMART:SM00487
SMART:SM00490	SUPFAM:SSF52540	UniParc:UPI0001D62D0E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:-:9147302..9150438

Molecular Weight (calculated)

66638.5 Da

IEP (calculated)

7.086

GRAVY (calculated)

-0.392

Length

610 amino acids

Sequence
(BLAST)

001: MLWSYASHYV PPQHRTNSFQ TLTDDSTSRG GARPRDGGRG GSGSRGFSRP RIPSNRLPVE EPQDGSDAIN FDAYESVPVE ASGKDVPPPV NTFNEADLDE
101: GLKRNIDRCK YVKPTPVQRH AIPIASAGRD LMACAQTGSG KTAAFCFPII SGILKGRSLS GFSSMPARGA AVAYPTALIL SPTRELSCQI RDEANKYAHQ
201: TGVKVVVAYG GAPITQQLRL MEKGVDILVA TPGRLVDIIE RERVSLTKIK YLALDEADRM LDMGFEHQIR KIVEQMQMPS PGIRQTLLFS ATFPNDIQKL
301: ASDFLSNYIF LSVGRVGSST ELIVQKIELV QDMDKRDHLI NHLRRQKVHG ANGKHALTLV FVETKRGADV LEGWLLRSGF SAVAIHGDKV QMERERALRS
401: FKSGLTPILV ATDVASRGLD IPHVAHVINF DLPRDIDNYV HRIGRTGRAG KSGLATAFFS DKNSPIAKAL IGLLQEANQE VPSWLNQYAT EGSSSGGGGR
501: GYEAQRYRSG SYGGHDFRNV TEPEVQNYNC YNTNGNAVQF VESYTADDAS YVDTSYDIQN SNIDCSFECL HIASSGSYNH TDSCELNGGG GRVEEDGPRG
601: YASIVATGWD

Best Arabidopsis Sequence Match ( AT2G42520.1 )
(BLAST)

001: MSASWADVAD SENTGSGSSN QNSHPSRPAY VPPHLRNRPA ASEPVAPLPA NDRVGYGGPP SGSRWAPGGS GVGVGGGGGY RADAGRPGSG SGYGGRGGGG
101: WNNRSGGWDR REREVNPFEN DDSEPEPAFT EQDNTVINFD AYEDIPIETS GDNVPPPVNT FAEIDLGEAL NLNIRRCKYV KPTPVQRHAI PILLEGRDLM
201: ACAQTGSGKT AAFCFPIISG IMKDQHVQRP RGSRTVYPLA VILSPTRELA SQIHDEAKKF SYQTGVKVVV AYGGTPINQQ LRELERGVDI LVATPGRLND
301: LLERARVSMQ MIRFLALDEA DRMLDMGFEP QIRKIVEQMD MPPRGVRQTL LFSATFPREI QRLAADFLAN YIFLAVGRVG SSTDLIVQRV EFVLDSDKRS
401: HLMDLLHAQR ENGIQGKQAL TLVFVETKRG ADSLENWLCI NGFPATSIHG DRTQQEREVA LKAFKSGRTP ILVATDVAAR GLDIPHVAHV VNFDLPNDID
501: DYVHRIGRTG RAGKSGLATA FFNDGNTSLA RPLAELMQEA NQEVPEWLTR YASRSSFGGG KNRRSGGRFG GRDFRREGSF GSGRGGYGGG GGGYGGGGGY
601: GGGGGYGGGG GYGGGYGGAS SGGYGGEPPS AWD

Arabidopsis Description

RH37DEAD-box ATP-dependent RNA helicase 37 [Source:UniProtKB/Swiss-Prot;Acc:Q84W89]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.