Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27757 | Soybean | nucleus | 96.92 | 96.66 |
| CDY72529 | Canola | cytosol | 41.21 | 73.03 |
| VIT_03s0038g04130.t01 | Wine grape | nucleus | 72.37 | 69.66 |
| AT3G09620.2 | Thale cress | nucleus | 61.05 | 68.08 |
| PGSC0003DMT400011665 | Potato | nucleus | 68.66 | 67.98 |
| Solyc12g098700.1.1 | Tomato | nucleus | 70.02 | 67.39 |
| AT1G20920.3 | Thale cress | nucleus | 68.93 | 65.27 |
| TraesCS2D01G149500.1 | Wheat | nucleus | 48.73 | 65.21 |
| CDY31513 | Canola | nucleus | 64.95 | 64.83 |
| CDY44720 | Canola | nucleus | 50.63 | 64.7 |
| Bra025856.1-P | Field mustard | nucleus | 68.57 | 64.65 |
| CDY41597 | Canola | nucleus | 45.2 | 64.55 |
| Os08t0159900-01 | Rice | extracellular, nucleus | 61.32 | 64.54 |
| EES14596 | Sorghum | nucleus | 61.23 | 63.65 |
| Bra029779.1-P | Field mustard | nucleus | 51.0 | 63.47 |
| OQU79814 | Sorghum | nucleus | 56.61 | 63.32 |
| HORVU0Hr1G020490.1 | Barley | nucleus | 60.78 | 62.95 |
| Zm00001d024533_P001 | Maize | nucleus | 60.6 | 62.82 |
| TraesCS7B01G187000.1 | Wheat | nucleus | 60.24 | 62.56 |
| TraesCS7D01G294500.1 | Wheat | nucleus | 58.06 | 62.41 |
| TraesCS7A01G298800.3 | Wheat | nucleus | 60.24 | 62.03 |
| GSMUA_Achr10P... | Banana | cytosol | 53.62 | 59.14 |
| TraesCS2B01G170700.1 | Wheat | nucleus | 53.62 | 58.21 |
| HORVU2Hr1G025790.1 | Barley | nucleus | 51.63 | 55.94 |
| KRH47127 | Soybean | nucleus | 18.48 | 40.24 |
| KRH44155 | Soybean | cytosol | 18.39 | 40.04 |
| KRH48684 | Soybean | cytosol, endoplasmic reticulum | 16.76 | 38.87 |
| KRH03228 | Soybean | nucleus | 20.47 | 37.54 |
| KRG96540 | Soybean | cytosol, mitochondrion | 25.54 | 36.72 |
| KRH57127 | Soybean | endoplasmic reticulum, nucleus | 20.11 | 36.27 |
| KRH68277 | Soybean | nucleus | 25.45 | 35.93 |
| KRH68534 | Soybean | cytosol | 18.39 | 34.58 |
| KRG94409 | Soybean | cytosol | 18.39 | 34.52 |
| KRH39630 | Soybean | nucleus | 15.94 | 32.77 |
| KRH74291 | Soybean | nucleus | 15.94 | 32.77 |
| KRH30661 | Soybean | endoplasmic reticulum | 16.49 | 32.21 |
| KRG98124 | Soybean | endoplasmic reticulum | 16.58 | 32.05 |
| KRG97325 | Soybean | endoplasmic reticulum | 17.03 | 31.81 |
| KRH31589 | Soybean | nucleus | 17.12 | 31.29 |
| KRH20283 | Soybean | plastid | 16.49 | 31.06 |
| KRH58901 | Soybean | nucleus | 17.12 | 30.78 |
| KRH42811 | Soybean | endoplasmic reticulum | 17.21 | 30.69 |
| KRH51212 | Soybean | nucleus | 19.47 | 30.67 |
| KRH71800 | Soybean | plastid | 16.94 | 30.61 |
| KRH01937 | Soybean | nucleus | 19.47 | 30.45 |
| KRH38030 | Soybean | endoplasmic reticulum | 16.76 | 30.28 |
| KRH03709 | Soybean | plastid | 15.85 | 28.69 |
| KRG93254 | Soybean | endoplasmic reticulum | 17.93 | 25.52 |
| KRH56577 | Soybean | nucleus | 17.57 | 25.03 |
| KRH36905 | Soybean | nucleus | 18.3 | 17.34 |
| KRH11875 | Soybean | endoplasmic reticulum | 18.75 | 17.24 |
Protein Annotations
| EntrezGene:100784306 | MapMan:16.4.7.1.2 | Gene3D:3.40.50.300 | EMBL:ACUP02000683 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom |
| EnsemblPlantsGene:GLYMA_01G229400 | GO:GO:0000166 | GO:GO:0000398 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 |
| GO:GO:0004004 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0010468 | GO:GO:0010501 | GO:GO:0016787 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| UniProt:I1JAI4 | InterPro:IPR001650 | InterPro:IPR014001 | InterPro:IPR014014 | EnsemblPlants:KRH77709 | ProteinID:KRH77709 |
| ProteinID:KRH77709.1 | ProteinID:KRH77710.1 | ProteinID:KRH77711.1 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 |
| ScanProsite:PS00039 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51195 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF25 |
| InterPro:RNA-helicase_DEAD-box_CS | InterPro:RNA_helicase_DEAD_Q_motif | SMART:SM00487 | SMART:SM00490 | SUPFAM:SSF52540 | UniParc:UPI0002337809 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:55717164..55722325
Molecular Weight (calculated)
125529.0 Da
IEP (calculated)
6.139
GRAVY (calculated)
-1.054
Length
1104 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEGKHKSRK ENHEVKDGDS KRSHRDRDRT GERGKDKNDG RHRDREKRDR ESRRPERERS TDSEDRYDRD REKRKDKDKD VDRERSRDKK RERDRTDRVR
0101: EKERERERKE DKERIRERER ERERRDHERE KEKERERGRR VRGREKRREV DSDCSDGESK EQDRKRHRKE DGDYKRERER SVSKPSRKSE EHEGSPRKKS
0201: GEDDSDTKDE EKKPTREEEM EDEQKRLDEE MEKRRRRVQE WQELRRKKEE AEREKQGEAS ANEPESGKTW TLEGESDDEE GLGTGKQTGM DVDEDDKPAD
0301: EEPKDVMVVD TDNGTIASDL QDGTAGAPED EEIDPLDAFM NSMVLPEVEK LNNAVTSSLS DKAIDVKPKD KGNGQNRGAQ SRKGSNKSIG RIIPGEESDS
0401: DYADDEVEKD PLDEDDDEFM KRVKKTKAEK LSLVDHSKID YEPFKKNFYI EVKEISKMTP EEAAVYRKQL ELKIHGKDVP KPIKSWHQTG LPSKILETIK
0501: KMNFEMPMPI QAQALPVIMS GRDCIGIAKT GSGKTLAFVL PMLRHIKDQP PVVAGDGPIG LIMAPTRELV QQIHSDIKKF AKVLGLRCVP VYGGSGVAQQ
0601: ISELKRGAEI VVCTPGRMID ILCTSSGKIT NLRRVTYLVM DEADRMFDMG FEPQITRIVQ NIRPDRQTVL FSATFPRQVE ILARKVLNKP VEIQVGGRSV
0701: VNKDITQLVE VRPDNERFLR LLEILGEWYE KGKILIFVHS QEKCDSLFKD LLRHGYPCLS LHGAKDQTDR ESTISDFKSN VCNLLVATSI AARGLDVKEL
0801: ELVINFDVPN HYEDYVHRVG RTGRAGRKGC AITFISEEEA RYAPDLLKAL ELSEQIVPND LKALAGSFMA KVNQGLEQAH GTGYGGSGFK FNEEEDEVRK
0901: AAKKAQAKEY GFEEEKSDSE DEDEGIRKAG GDISQHSAFA QIIAATKGNA PALPTPILLP SLQVLPGTGL PLPANDGAAR AAAIAALNLQ DKLDKIRSEA
1001: LPEHYEAELE INDFPQNARW KVTHKETLGP ISEWSGAAIT TRGQFFPPGK IPGPGERKLY LFIEGPTEHS VKSAKADLKR VLEDITNQAL QLPGGTQPGK
1101: YSVV
0101: EKERERERKE DKERIRERER ERERRDHERE KEKERERGRR VRGREKRREV DSDCSDGESK EQDRKRHRKE DGDYKRERER SVSKPSRKSE EHEGSPRKKS
0201: GEDDSDTKDE EKKPTREEEM EDEQKRLDEE MEKRRRRVQE WQELRRKKEE AEREKQGEAS ANEPESGKTW TLEGESDDEE GLGTGKQTGM DVDEDDKPAD
0301: EEPKDVMVVD TDNGTIASDL QDGTAGAPED EEIDPLDAFM NSMVLPEVEK LNNAVTSSLS DKAIDVKPKD KGNGQNRGAQ SRKGSNKSIG RIIPGEESDS
0401: DYADDEVEKD PLDEDDDEFM KRVKKTKAEK LSLVDHSKID YEPFKKNFYI EVKEISKMTP EEAAVYRKQL ELKIHGKDVP KPIKSWHQTG LPSKILETIK
0501: KMNFEMPMPI QAQALPVIMS GRDCIGIAKT GSGKTLAFVL PMLRHIKDQP PVVAGDGPIG LIMAPTRELV QQIHSDIKKF AKVLGLRCVP VYGGSGVAQQ
0601: ISELKRGAEI VVCTPGRMID ILCTSSGKIT NLRRVTYLVM DEADRMFDMG FEPQITRIVQ NIRPDRQTVL FSATFPRQVE ILARKVLNKP VEIQVGGRSV
0701: VNKDITQLVE VRPDNERFLR LLEILGEWYE KGKILIFVHS QEKCDSLFKD LLRHGYPCLS LHGAKDQTDR ESTISDFKSN VCNLLVATSI AARGLDVKEL
0801: ELVINFDVPN HYEDYVHRVG RTGRAGRKGC AITFISEEEA RYAPDLLKAL ELSEQIVPND LKALAGSFMA KVNQGLEQAH GTGYGGSGFK FNEEEDEVRK
0901: AAKKAQAKEY GFEEEKSDSE DEDEGIRKAG GDISQHSAFA QIIAATKGNA PALPTPILLP SLQVLPGTGL PLPANDGAAR AAAIAALNLQ DKLDKIRSEA
1001: LPEHYEAELE INDFPQNARW KVTHKETLGP ISEWSGAAIT TRGQFFPPGK IPGPGERKLY LFIEGPTEHS VKSAKADLKR VLEDITNQAL QLPGGTQPGK
1101: YSVV
001: MLEKSKSRKE NDRKDRDRSK KENGRRDTTE MRSRVKRCDS EEEERIRIRR DRKSSDFEEE EYERDSKRRG EDKGRGRRER DRDRGKYLKR DRERREREKE
101: KGRKKQKKER SREDCNEESD DVKCGLKRKR TERSRHGDDD VEKKTRDEQV EDEQKQLAEE VEKRRRRVQE WQELKRQNEE AQIESKGPET GKAWTLDGES
201: DDEVKSDSEM DVDRDTKLEN GGDAKMVASE NETAVTVSEN GGDRAADEDE IDPLDAFMNT MVLPEVEKLS NIVIDGILDF KMNGKETGDQ AKKGFNKAAL
301: GRIIQGEDSD SDYSEPKSDD DPSLDEDDEE FMKRVKKTKA EKLSLVDHSK IEYEPFRKNF YIEVKDISRM TQDAVNAYRK ELELKVHGKD VPRPIQFWHQ
401: TGLTSKILDT LKKLNYEKPM PIQAQALPII MSGRDCIGVA KTGSGKTLGF VLPMLRHIKD QPPVEAGDGP IGLVMAPTRE LVQQIYSDIR KFSKALGIIC
501: VPVYGGSGVA QQISELKRGT EIVVCTPGRM IDILCTSSGK ITNLRRVTYL VMDEADRMFD MGFEPQITRI VQNIRPDRQT VLFSATFPRQ VETLARKVLN
601: KPVEIQVGGR SVVNKDITQL VEIRPESERF SRLLELLGEW YEKGKVLVFV RSQEKSISDF KSDVCNLLIA TSVAARGLDV KELELVVNFD APNHYEDYVH
701: RVGRTGRAGR KGCAVTFISE DDAKYAPDLV KALELSEQPV PDDVKAVAEG FMAKVKQGIE QAHGTGYGGS GFKFNEEEDE VRKAAKKAQA KEYGFEEEKS
801: DSEDENDVVR KAGGDISQQQ ITLAQIAAIA SAASKAPVTA NQLLPNGGGL ATEPGIPPTD GAGRVAAMIA AANVQQYLAK IQADAIPEHY EAELEINDFP
901: QNARWKVTHK ETLGPISEWS GASITTRGKF YEAGRIPGPE ERKLYLFVEG PTEISVKTAK AELKRVLEDI TNQTFSLPGG AQSGRYSVL
101: KGRKKQKKER SREDCNEESD DVKCGLKRKR TERSRHGDDD VEKKTRDEQV EDEQKQLAEE VEKRRRRVQE WQELKRQNEE AQIESKGPET GKAWTLDGES
201: DDEVKSDSEM DVDRDTKLEN GGDAKMVASE NETAVTVSEN GGDRAADEDE IDPLDAFMNT MVLPEVEKLS NIVIDGILDF KMNGKETGDQ AKKGFNKAAL
301: GRIIQGEDSD SDYSEPKSDD DPSLDEDDEE FMKRVKKTKA EKLSLVDHSK IEYEPFRKNF YIEVKDISRM TQDAVNAYRK ELELKVHGKD VPRPIQFWHQ
401: TGLTSKILDT LKKLNYEKPM PIQAQALPII MSGRDCIGVA KTGSGKTLGF VLPMLRHIKD QPPVEAGDGP IGLVMAPTRE LVQQIYSDIR KFSKALGIIC
501: VPVYGGSGVA QQISELKRGT EIVVCTPGRM IDILCTSSGK ITNLRRVTYL VMDEADRMFD MGFEPQITRI VQNIRPDRQT VLFSATFPRQ VETLARKVLN
601: KPVEIQVGGR SVVNKDITQL VEIRPESERF SRLLELLGEW YEKGKVLVFV RSQEKSISDF KSDVCNLLIA TSVAARGLDV KELELVVNFD APNHYEDYVH
701: RVGRTGRAGR KGCAVTFISE DDAKYAPDLV KALELSEQPV PDDVKAVAEG FMAKVKQGIE QAHGTGYGGS GFKFNEEEDE VRKAAKKAQA KEYGFEEEKS
801: DSEDENDVVR KAGGDISQQQ ITLAQIAAIA SAASKAPVTA NQLLPNGGGL ATEPGIPPTD GAGRVAAMIA AANVQQYLAK IQADAIPEHY EAELEINDFP
901: QNARWKVTHK ETLGPISEWS GASITTRGKF YEAGRIPGPE ERKLYLFVEG PTEISVKTAK AELKRVLEDI TNQTFSLPGG AQSGRYSVL
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRR1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.