Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra029779.1-P | Field mustard | nucleus | 96.18 | 93.69 |
| CDY41597 | Canola | nucleus | 75.69 | 84.61 |
| CDY72529 | Canola | cytosol | 44.79 | 62.12 |
| AT3G09620.2 | Thale cress | nucleus | 63.77 | 55.66 |
| TraesCS2D01G149500.1 | Wheat | nucleus | 51.5 | 53.94 |
| KRH77709 | Soybean | nucleus | 64.7 | 50.63 |
| KRH27757 | Soybean | nucleus | 64.47 | 50.32 |
| Os08t0159900-01 | Rice | extracellular, nucleus | 60.88 | 50.14 |
| OQU79814 | Sorghum | nucleus | 57.18 | 50.05 |
| CDY31513 | Canola | nucleus | 63.77 | 49.82 |
| EES14596 | Sorghum | nucleus | 60.65 | 49.34 |
| TraesCS7B01G187000.1 | Wheat | nucleus | 60.3 | 49.01 |
| HORVU0Hr1G020490.1 | Barley | nucleus | 60.42 | 48.97 |
| Zm00001d024533_P001 | Maize | nucleus | 60.19 | 48.83 |
| TraesCS7D01G294500.1 | Wheat | nucleus | 57.75 | 48.59 |
| PGSC0003DMT400011665 | Potato | nucleus | 62.5 | 48.43 |
| TraesCS7A01G298800.3 | Wheat | nucleus | 60.07 | 48.41 |
| VIT_03s0038g04130.t01 | Wine grape | nucleus | 62.96 | 47.43 |
| Solyc12g098700.1.1 | Tomato | nucleus | 62.38 | 46.99 |
| TraesCS2B01G170700.1 | Wheat | nucleus | 54.17 | 46.02 |
| HORVU2Hr1G025790.1 | Barley | nucleus | 53.7 | 45.53 |
| GSMUA_Achr10P... | Banana | cytosol | 50.58 | 43.66 |
| CDY10596 | Canola | nucleus | 23.38 | 40.48 |
| CDY02459 | Canola | cytosol | 23.26 | 40.28 |
| CDY47978 | Canola | plastid | 18.4 | 38.04 |
| CDX83333 | Canola | nucleus | 27.55 | 37.36 |
| CDX84672 | Canola | cytosol | 19.33 | 37.36 |
| CDY37796 | Canola | cytosol | 29.63 | 34.88 |
| CDY16735 | Canola | cytosol | 23.84 | 34.86 |
| CDY48128 | Canola | cytosol | 23.84 | 34.68 |
| CDX80096 | Canola | cytosol | 29.17 | 34.62 |
| CDX95719 | Canola | cytosol | 29.4 | 34.56 |
| CDX98304 | Canola | cytosol, plastid | 18.29 | 34.27 |
| CDY61276 | Canola | cytosol | 19.33 | 32.18 |
| CDX87315 | Canola | cytosol | 19.21 | 32.05 |
| CDY39973 | Canola | cytosol | 19.1 | 31.85 |
| CDY38671 | Canola | cytosol | 18.98 | 31.6 |
| CDX67949 | Canola | cytosol | 19.56 | 31.07 |
| CDY37696 | Canola | nucleus | 21.06 | 30.85 |
| CDY41747 | Canola | nucleus | 19.21 | 30.74 |
| CDY14843 | Canola | cytosol, plastid | 21.64 | 30.56 |
| CDY65864 | Canola | nucleus | 18.87 | 30.52 |
| CDY66221 | Canola | nucleus | 18.87 | 30.41 |
| CDY53786 | Canola | nucleus | 20.6 | 30.17 |
| CDY06034 | Canola | cytosol | 20.02 | 30.09 |
| CDX67749 | Canola | cytosol | 20.83 | 29.9 |
| CDX71948 | Canola | cytosol | 20.6 | 29.82 |
| CDX98301 | Canola | cytosol | 20.6 | 29.62 |
| CDY49232 | Canola | cytosol | 21.41 | 29.6 |
| CDX67752 | Canola | cytosol | 21.53 | 29.38 |
| CDX71944 | Canola | cytosol | 21.53 | 29.34 |
| CDX79541 | Canola | nucleus | 20.14 | 27.66 |
| CDY28671 | Canola | cytosol | 20.49 | 26.7 |
| CDX84112 | Canola | nucleus | 9.26 | 26.67 |
| CDX91943 | Canola | cytosol | 20.37 | 26.47 |
| CDX91036 | Canola | cytosol | 20.49 | 25.88 |
| CDX74304 | Canola | cytosol | 20.49 | 25.73 |
| CDX88990 | Canola | cytosol, plastid | 16.44 | 25.45 |
| CDX79384 | Canola | cytosol | 11.0 | 24.36 |
| CDX85591 | Canola | cytosol | 20.6 | 23.67 |
| CDY08048 | Canola | nucleus | 21.64 | 21.25 |
| CDX74101 | Canola | cytosol | 21.53 | 21.23 |
| CDY00570 | Canola | nucleus | 12.15 | 17.3 |
| CDX91039 | Canola | cytosol | 1.5 | 7.43 |
| CDX91037 | Canola | cytosol | 1.5 | 7.43 |
Protein Annotations
| MapMan:16.4.7.1.2 | Gene3D:3.40.50.300 | GO:A0A078I1I8 | UniProt:A0A078I1I8 | EnsemblPlants:CDY44720 | ProteinID:CDY44720 |
| ProteinID:CDY44720.1 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0005488 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00080699001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001650 |
| InterPro:IPR014001 | InterPro:IPR014014 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | ScanProsite:PS00039 |
| PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51195 | PANTHER:PTHR24031 | PANTHER:PTHR24031:SF25 | InterPro:RNA-helicase_DEAD-box_CS |
| InterPro:RNA_helicase_DEAD_Q_motif | SMART:SM00487 | SMART:SM00490 | SUPFAM:SSF52540 | UniParc:UPI0004EF34A7 | SEG:seg |
Description
BnaA05g28860DBnaA05g28860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1I8]
Coordinates
chrLK032599:-:184728..187390
Molecular Weight (calculated)
97945.0 Da
IEP (calculated)
7.232
GRAVY (calculated)
-0.841
Length
864 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKNLRDRG RDRSEERRKG KRLEKDMRKR RCESVRSIDS EDERDRYVGE GQREKRKEKD KDRRRRDMEK GGKNREHERD RGQDRKRERS QGEEVEDGDK
101: QLDEEAEKRR RRLQEWQELK KKKEETKSEN KSWNLEGESD DEQVPPQTET DDAMMVDLDE EVIDPLDAFM NTMVLPEVEK LSNAASSLGT VLDSNKDVNK
201: AAIGWIIQGE DSDSDYSETK YDDDQPSMDK ENVELMKKTK GDKLTLVDHS NIEYQPFRKN FYIQVKDISN LTEQEVNTHR KELEIKVHGK DVPRPIKSWH
301: QTGLTTRILN TIKKLNFQKP TPVQAQALPL IMSGRDCIGV APTGSGKTLS FVLPMLRHIN SQPPVEPGDG PIGLVMAPTR ELVQQIHTDI KKFGKSLSIR
401: CVAVYGGSGV AQQISELKRG TEIVVCTPGR MIDILSTNSG KVTNLQRVTF LVMDEADRMF DMGFEPQITR IIQNIRPDRH TVLFSATFPR QVEALARKVL
501: TRPVEIQAGG RSVVNKDITQ FVEIKLESEK RPRLVKLIEE WYGKGKVLVF VGSQEKCDGL YNDLKNKCGY RCQSLHGGKD QIHREVAVSE FKSSVCNLLV
601: AKSVAARGLD VKGVELVVNF DAPNHYEEYV HRVGRTGRAG RKGCAVTFVS EDDARYAPDL VKALERSEQV VPDGLRAMAD GYMEKVREGV EKGHGSGFGG
701: SGFKFNEEED VRRAAKEAQK KEDGVEEEDK SELEDEGEIS QQKQKATMVV AAMLRGCART QQHYEGELEI NDFPQNARWK VTRRETLGSI SDWSGAAITT
801: RGQFFTPGRS PGHGERKLYL FIEGTSEESV KAARGELMRV VNDITSQALS LPGRSSQHGR YSVL
101: QLDEEAEKRR RRLQEWQELK KKKEETKSEN KSWNLEGESD DEQVPPQTET DDAMMVDLDE EVIDPLDAFM NTMVLPEVEK LSNAASSLGT VLDSNKDVNK
201: AAIGWIIQGE DSDSDYSETK YDDDQPSMDK ENVELMKKTK GDKLTLVDHS NIEYQPFRKN FYIQVKDISN LTEQEVNTHR KELEIKVHGK DVPRPIKSWH
301: QTGLTTRILN TIKKLNFQKP TPVQAQALPL IMSGRDCIGV APTGSGKTLS FVLPMLRHIN SQPPVEPGDG PIGLVMAPTR ELVQQIHTDI KKFGKSLSIR
401: CVAVYGGSGV AQQISELKRG TEIVVCTPGR MIDILSTNSG KVTNLQRVTF LVMDEADRMF DMGFEPQITR IIQNIRPDRH TVLFSATFPR QVEALARKVL
501: TRPVEIQAGG RSVVNKDITQ FVEIKLESEK RPRLVKLIEE WYGKGKVLVF VGSQEKCDGL YNDLKNKCGY RCQSLHGGKD QIHREVAVSE FKSSVCNLLV
601: AKSVAARGLD VKGVELVVNF DAPNHYEEYV HRVGRTGRAG RKGCAVTFVS EDDARYAPDL VKALERSEQV VPDGLRAMAD GYMEKVREGV EKGHGSGFGG
701: SGFKFNEEED VRRAAKEAQK KEDGVEEEDK SELEDEGEIS QQKQKATMVV AAMLRGCART QQHYEGELEI NDFPQNARWK VTRRETLGSI SDWSGAAITT
801: RGQFFTPGRS PGHGERKLYL FIEGTSEESV KAARGELMRV VNDITSQALS LPGRSSQHGR YSVL
001: MLEKSKSRKE NDRKDRDRSK KENGRRDTTE MRSRVKRCDS EEEERIRIRR DRKSSDFEEE EYERDSKRRG EDKGRGRRER DRDRGKYLKR DRERREREKE
101: KGRKKQKKER SREDCNEESD DVKCGLKRKR TERSRHGDDD VEKKTRDEQV EDEQKQLAEE VEKRRRRVQE WQELKRQNEE AQIESKGPET GKAWTLDGES
201: DDEVKSDSEM DVDRDTKLEN GGDAKMVASE NETAVTVSEN GGDRAADEDE IDPLDAFMNT MVLPEVEKLS NIVIDGILDF KMNGKETGDQ AKKGFNKAAL
301: GRIIQGEDSD SDYSEPKSDD DPSLDEDDEE FMKRVKKTKA EKLSLVDHSK IEYEPFRKNF YIEVKDISRM TQDAVNAYRK ELELKVHGKD VPRPIQFWHQ
401: TGLTSKILDT LKKLNYEKPM PIQAQALPII MSGRDCIGVA KTGSGKTLGF VLPMLRHIKD QPPVEAGDGP IGLVMAPTRE LVQQIYSDIR KFSKALGIIC
501: VPVYGGSGVA QQISELKRGT EIVVCTPGRM IDILCTSSGK ITNLRRVTYL VMDEADRMFD MGFEPQITRI VQNIRPDRQT VLFSATFPRQ VETLARKVLN
601: KPVEIQVGGR SVVNKDITQL VEIRPESERF SRLLELLGEW YEKGKVLVFV RSQEKSISDF KSDVCNLLIA TSVAARGLDV KELELVVNFD APNHYEDYVH
701: RVGRTGRAGR KGCAVTFISE DDAKYAPDLV KALELSEQPV PDDVKAVAEG FMAKVKQGIE QAHGTGYGGS GFKFNEEEDE VRKAAKKAQA KEYGFEEEKS
801: DSEDENDVVR KAGGDISQQQ ITLAQIAAIA SAASKAPVTA NQLLPNGGGL ATEPGIPPTD GAGRVAAMIA AANVQQYLAK IQADAIPEHY EAELEINDFP
901: QNARWKVTHK ETLGPISEWS GASITTRGKF YEAGRIPGPE ERKLYLFVEG PTEISVKTAK AELKRVLEDI TNQTFSLPGG AQSGRYSVL
101: KGRKKQKKER SREDCNEESD DVKCGLKRKR TERSRHGDDD VEKKTRDEQV EDEQKQLAEE VEKRRRRVQE WQELKRQNEE AQIESKGPET GKAWTLDGES
201: DDEVKSDSEM DVDRDTKLEN GGDAKMVASE NETAVTVSEN GGDRAADEDE IDPLDAFMNT MVLPEVEKLS NIVIDGILDF KMNGKETGDQ AKKGFNKAAL
301: GRIIQGEDSD SDYSEPKSDD DPSLDEDDEE FMKRVKKTKA EKLSLVDHSK IEYEPFRKNF YIEVKDISRM TQDAVNAYRK ELELKVHGKD VPRPIQFWHQ
401: TGLTSKILDT LKKLNYEKPM PIQAQALPII MSGRDCIGVA KTGSGKTLGF VLPMLRHIKD QPPVEAGDGP IGLVMAPTRE LVQQIYSDIR KFSKALGIIC
501: VPVYGGSGVA QQISELKRGT EIVVCTPGRM IDILCTSSGK ITNLRRVTYL VMDEADRMFD MGFEPQITRI VQNIRPDRQT VLFSATFPRQ VETLARKVLN
601: KPVEIQVGGR SVVNKDITQL VEIRPESERF SRLLELLGEW YEKGKVLVFV RSQEKSISDF KSDVCNLLIA TSVAARGLDV KELELVVNFD APNHYEDYVH
701: RVGRTGRAGR KGCAVTFISE DDAKYAPDLV KALELSEQPV PDDVKAVAEG FMAKVKQGIE QAHGTGYGGS GFKFNEEEDE VRKAAKKAQA KEYGFEEEKS
801: DSEDENDVVR KAGGDISQQQ ITLAQIAAIA SAASKAPVTA NQLLPNGGGL ATEPGIPPTD GAGRVAAMIA AANVQQYLAK IQADAIPEHY EAELEINDFP
901: QNARWKVTHK ETLGPISEWS GASITTRGKF YEAGRIPGPE ERKLYLFVEG PTEISVKTAK AELKRVLEDI TNQTFSLPGG AQSGRYSVL
Arabidopsis Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRR1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.