Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74304 | Canola | cytosol | 98.65 | 95.35 |
| AT3G01540.2 | Thale cress | cytosol | 82.11 | 88.21 |
| CDY28671 | Canola | cytosol | 85.11 | 85.37 |
| CDX91036 | Canola | cytosol | 72.18 | 70.18 |
| CDX85591 | Canola | cytosol | 74.14 | 65.56 |
| PGSC0003DMT400080614 | Potato | nucleus | 59.85 | 64.93 |
| Solyc12g035130.1.1 | Tomato | nucleus | 59.25 | 64.38 |
| CDX91039 | Canola | cytosol | 16.24 | 61.71 |
| CDX91037 | Canola | cytosol | 16.24 | 61.71 |
| Solyc02g086660.2.1 | Tomato | nucleus | 62.71 | 59.07 |
| PGSC0003DMT400001391 | Potato | cytosol | 63.16 | 57.53 |
| TraesCS3A01G130200.4 | Wheat | cytosol | 55.94 | 57.23 |
| TraesCS3B01G149300.8 | Wheat | cytosol | 55.79 | 57.08 |
| TraesCS3D01G131100.11 | Wheat | cytosol | 55.94 | 56.97 |
| Zm00001d008725_P003 | Maize | cytosol | 58.8 | 56.42 |
| KRH56577 | Soybean | nucleus | 65.11 | 55.87 |
| KRG93254 | Soybean | endoplasmic reticulum | 64.51 | 55.28 |
| Zm00001d039673_P002 | Maize | cytosol | 57.74 | 54.78 |
| OQU86230 | Sorghum | cytosol | 57.89 | 53.85 |
| HORVU3Hr1G024610.13 | Barley | cytosol, plastid | 56.24 | 52.9 |
| Os01t0172200-01 | Rice | cytosol | 57.74 | 50.59 |
| VIT_14s0066g01020.t01 | Wine grape | cytosol | 64.96 | 50.06 |
| KXG32714 | Sorghum | nucleus | 59.4 | 49.94 |
| Zm00001d011155_P012 | Maize | nucleus | 58.5 | 49.68 |
| GSMUA_Achr8P31890_001 | Banana | nucleus | 58.35 | 49.36 |
| Os01t0549400-01 | Rice | nucleus | 58.05 | 48.74 |
| Zm00001d044510_P002 | Maize | mitochondrion | 58.65 | 48.63 |
| TraesCS3D01G202500.3 | Wheat | nucleus | 56.99 | 46.85 |
| CDY10596 | Canola | nucleus | 34.74 | 46.29 |
| TraesCS3A01G194200.1 | Wheat | nucleus | 54.44 | 46.23 |
| CDY02459 | Canola | cytosol | 34.59 | 46.09 |
| TraesCS3B01G230800.1 | Wheat | nucleus | 53.98 | 45.73 |
| CDY47978 | Canola | plastid | 25.71 | 40.91 |
| CDY16735 | Canola | cytosol | 35.64 | 40.1 |
| CDY48128 | Canola | cytosol | 35.79 | 40.07 |
| CDX74101 | Canola | cytosol | 50.53 | 38.36 |
| CDY08048 | Canola | nucleus | 50.38 | 38.07 |
| CDX98304 | Canola | cytosol, plastid | 25.56 | 36.88 |
| CDX84672 | Canola | cytosol | 24.36 | 36.24 |
| CDY41747 | Canola | nucleus | 27.67 | 34.07 |
| CDY66221 | Canola | nucleus | 27.37 | 33.96 |
| CDY06034 | Canola | cytosol | 29.02 | 33.57 |
| CDY65864 | Canola | nucleus | 26.92 | 33.52 |
| CDX71948 | Canola | cytosol | 29.77 | 33.17 |
| CDY14843 | Canola | cytosol, plastid | 30.23 | 32.84 |
| CDX98301 | Canola | cytosol | 29.47 | 32.61 |
| CDX67749 | Canola | cytosol | 29.47 | 32.56 |
| CDY49232 | Canola | cytosol | 30.08 | 32.0 |
| CDX67752 | Canola | cytosol | 30.38 | 31.91 |
| CDX71944 | Canola | cytosol | 29.92 | 31.39 |
| CDX84112 | Canola | nucleus | 13.68 | 30.33 |
| CDX87315 | Canola | cytosol | 23.61 | 30.31 |
| CDY61276 | Canola | cytosol | 23.61 | 30.25 |
| CDY38671 | Canola | cytosol | 23.61 | 30.25 |
| CDX67949 | Canola | cytosol | 24.66 | 30.15 |
| CDY39973 | Canola | cytosol | 23.31 | 29.92 |
| CDY53786 | Canola | nucleus | 25.71 | 28.98 |
| CDY37696 | Canola | nucleus | 25.11 | 28.31 |
| CDX83333 | Canola | nucleus | 26.32 | 27.47 |
| CDY72529 | Canola | cytosol | 24.51 | 26.16 |
| CDX79541 | Canola | nucleus | 24.51 | 25.91 |
| CDX88990 | Canola | cytosol, plastid | 21.35 | 25.45 |
| CDY37796 | Canola | cytosol | 27.97 | 25.34 |
| CDX80096 | Canola | cytosol | 27.67 | 25.27 |
| CDX95719 | Canola | cytosol | 27.67 | 25.03 |
| CDX79384 | Canola | cytosol | 13.23 | 22.56 |
| CDY44720 | Canola | nucleus | 26.47 | 20.37 |
| CDY41597 | Canola | nucleus | 23.31 | 20.05 |
| CDY00570 | Canola | nucleus | 16.09 | 17.63 |
| CDY31513 | Canola | nucleus | 26.17 | 15.73 |
Protein Annotations
| Gene3D:2.20.70.10 | Gene3D:3.40.50.300 | MapMan:35.1 | GO:A0A078DXE9 | EnsemblPlants:CDX91943 | ProteinID:CDX91943 |
| ProteinID:CDX91943.1 | InterPro:DEAD/DEAH_box_helicase_dom | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005524 | EnsemblPlantsGene:GSBRNA2T00153579001 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C | InterPro:IPR001202 |
| InterPro:IPR001650 | InterPro:IPR014001 | InterPro:P-loop_NTPase | PFAM:PF00270 | PFAM:PF00271 | PFAM:PF00397 |
| ScanProsite:PS00039 | ScanProsite:PS01159 | PFscan:PS50020 | PFscan:PS51192 | PFscan:PS51194 | PANTHER:PTHR24031 |
| PANTHER:PTHR24031:SF255 | InterPro:RNA-helicase_DEAD-box_CS | SMART:SM00456 | SMART:SM00487 | SMART:SM00490 | SUPFAM:SSF51045 |
| SUPFAM:SSF52540 | UniParc:UPI0004EF14F4 | InterPro:WW_dom | InterPro:WW_dom_sf | SEG:seg | : |
Description
BnaC03g32450D
Coordinates
chrLK031870:+:925473..929150
Molecular Weight (calculated)
72711.7 Da
IEP (calculated)
10.456
GRAVY (calculated)
-0.526
Length
665 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATAPSAVR YAPEDHSLPK PWKGLVDDRT GYLYFWNPET NVTQYERPQP PSNLPLSSSS VQVPQASAVP NGSSYAPAKG GDDKYSRATS DGGPRRSRFS
101: EIDDRSGAPY LNGAANGLGN SLPPSSAPVN DISPEAYCRR HEITVSGGQV PPPLMSFETT GFPPELLRET YFITLGAMFA PGRSLCRLPK SSKLVVGPVN
201: GVVMFHFTTG SRLKKRRPPT AGFSAPTPIQ AQSWPIAMQG RDIVAIAKTG SGKTLGYLLP GFMHLQRVRN DSRMGPTILV LSPTRELATQ IQDEAVKFGR
301: SSRISCTCLY GGAPKGPQLR DLERGADIVV ATPGRLNDIL EMRRISLRQV SYLVLDEADR MLDMGFEPQI RKIVKEIPTK RQTLMYTATW PKGVRKIAAD
401: LLVNPAQVNI GNVDELVANK SITQHIEVVA PMEKQRRLEQ ILRSQEPGSK VIIFCSTKRM CDQLTRNLTR QFGAAAIHGD KSQPERDNVL NQFRSGRTPV
501: LVATDVAARG LDVKDIRAVI NYDFPNGVED YVHRIGRTGR AGATGQAFTF FGDQDSKHAS DLIKILEGAN QRVPPQIRDM AARGGGGMNK FSRWGPPSGG
601: RGSDSGYGGR GGFDSRDSGM GSRSSNGWGR ERERSRSPER FNRVPPPSST GSPPRSFHEA MMKHR
101: EIDDRSGAPY LNGAANGLGN SLPPSSAPVN DISPEAYCRR HEITVSGGQV PPPLMSFETT GFPPELLRET YFITLGAMFA PGRSLCRLPK SSKLVVGPVN
201: GVVMFHFTTG SRLKKRRPPT AGFSAPTPIQ AQSWPIAMQG RDIVAIAKTG SGKTLGYLLP GFMHLQRVRN DSRMGPTILV LSPTRELATQ IQDEAVKFGR
301: SSRISCTCLY GGAPKGPQLR DLERGADIVV ATPGRLNDIL EMRRISLRQV SYLVLDEADR MLDMGFEPQI RKIVKEIPTK RQTLMYTATW PKGVRKIAAD
401: LLVNPAQVNI GNVDELVANK SITQHIEVVA PMEKQRRLEQ ILRSQEPGSK VIIFCSTKRM CDQLTRNLTR QFGAAAIHGD KSQPERDNVL NQFRSGRTPV
501: LVATDVAARG LDVKDIRAVI NYDFPNGVED YVHRIGRTGR AGATGQAFTF FGDQDSKHAS DLIKILEGAN QRVPPQIRDM AARGGGGMNK FSRWGPPSGG
601: RGSDSGYGGR GGFDSRDSGM GSRSSNGWGR ERERSRSPER FNRVPPPSST GSPPRSFHEA MMKHR
001: MAATAAASVV RYAPEDHTLP KPWKGLIDDR TGYLYFWNPE TNVTQYEKPT PSLPPKFSPA VSVSSSVQVQ QTDAYAPPKD DDKYSRGSER VSRFSEGGRS
101: GPPYSNGAAN GVGDSAYGAA STRVPLPSSA PASELSPEAY SRRHEITVSG GQVPPPLMSF EATGFPPELL REVLSAGFSA PTPIQAQSWP IAMQGRDIVA
201: IAKTGSGKTL GYLIPGFLHL QRIRNDSRMG PTILVLSPTR ELATQIQEEA VKFGRSSRIS CTCLYGGAPK GPQLRDLERG ADIVVATPGR LNDILEMRRI
301: SLRQISYLVL DEADRMLDMG FEPQIRKIVK EIPTKRQTLM YTATWPKGVR KIAADLLVNP AQVNIGNVDE LVANKSITQH IEVVAPMEKQ RRLEQILRSQ
401: EPGSKVIIFC STKRMCDQLT RNLTRQFGAA AIHGDKSQPE RDNVLNQFRS GRTPVLVATD VAARGLDVKD IRAVVNYDFP NGVEDYVHRI GRTGRAGATG
501: QAFTFFGDQD SKHASDLIKI LEGANQRVPP QIREMATRGG GGMNKFSRWG PPSGGRGRGG DSGYGGRGSF ASRDSRSSNG WGRERERSRS PERFNRAPPP
601: SSTGSPPRSF HETMMMKHR
101: GPPYSNGAAN GVGDSAYGAA STRVPLPSSA PASELSPEAY SRRHEITVSG GQVPPPLMSF EATGFPPELL REVLSAGFSA PTPIQAQSWP IAMQGRDIVA
201: IAKTGSGKTL GYLIPGFLHL QRIRNDSRMG PTILVLSPTR ELATQIQEEA VKFGRSSRIS CTCLYGGAPK GPQLRDLERG ADIVVATPGR LNDILEMRRI
301: SLRQISYLVL DEADRMLDMG FEPQIRKIVK EIPTKRQTLM YTATWPKGVR KIAADLLVNP AQVNIGNVDE LVANKSITQH IEVVAPMEKQ RRLEQILRSQ
401: EPGSKVIIFC STKRMCDQLT RNLTRQFGAA AIHGDKSQPE RDNVLNQFRS GRTPVLVATD VAARGLDVKD IRAVVNYDFP NGVEDYVHRI GRTGRAGATG
501: QAFTFFGDQD SKHASDLIKI LEGANQRVPP QIREMATRGG GGMNKFSRWG PPSGGRGRGG DSGYGGRGSF ASRDSRSSNG WGRERERSRS PERFNRAPPP
601: SSTGSPPRSF HETMMMKHR
Arabidopsis Description
RH14DEAD-box ATP-dependent RNA helicase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q8H136]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.