Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG94409 | Soybean | cytosol | 98.98 | 98.81 |
| VIT_09s0002g08120.t01 | Wine grape | cytosol | 89.95 | 89.95 |
| CDY38671 | Canola | cytosol | 79.22 | 89.6 |
| PGSC0003DMT400036663 | Potato | cytosol | 89.61 | 89.3 |
| PGSC0003DMT400073340 | Potato | cytosol | 88.76 | 88.45 |
| Solyc03g117440.2.1 | Tomato | cytosol, nucleus | 89.61 | 88.4 |
| CDY61276 | Canola | cytosol | 78.02 | 88.25 |
| CDY39973 | Canola | cytosol | 77.85 | 88.22 |
| Os02t0150100-02 | Rice | cytosol | 68.99 | 88.04 |
| CDX87315 | Canola | cytosol | 77.51 | 87.84 |
| Solyc06g068280.2.1 | Tomato | extracellular, nucleus | 88.93 | 87.73 |
| Bra008471.1-P | Field mustard | cytosol | 82.62 | 86.15 |
| AT5G51280.1 | Thale cress | cytosol | 86.2 | 85.62 |
| Bra018133.1-P | Field mustard | cytosol | 85.35 | 85.2 |
| Bra035177.1-P | Field mustard | cytosol | 84.67 | 84.52 |
| CDX67949 | Canola | cytosol | 77.17 | 83.27 |
| GSMUA_Achr2P09160_001 | Banana | cytosol | 77.34 | 83.0 |
| AT4G33370.1 | Thale cress | cytosol | 75.81 | 82.1 |
| Bra003568.1-P | Field mustard | cytosol | 81.6 | 81.05 |
| Zm00001d047502_P001 | Maize | extracellular | 80.58 | 76.54 |
| EER92293 | Sorghum | cytosol | 80.58 | 76.54 |
| TraesCS3B01G141300.1 | Wheat | cytosol | 79.39 | 75.9 |
| HORVU5Hr1G048040.1 | Barley | plastid | 73.94 | 75.87 |
| CDX79384 | Canola | cytosol | 49.57 | 74.62 |
| TraesCS5D01G159000.1 | Wheat | cytosol | 75.81 | 73.19 |
| TraesCS5B01G152200.1 | Wheat | cytosol | 75.64 | 72.91 |
| HORVU3Hr1G022710.1 | Barley | mitochondrion | 79.05 | 72.73 |
| TraesCS5A01G153700.1 | Wheat | cytosol | 72.06 | 72.56 |
| Os06t0697200-00 | Rice | cytosol | 75.64 | 71.73 |
| GSMUA_Achr1P13820_001 | Banana | mitochondrion | 65.93 | 71.4 |
| TraesCS3A01G122100.1 | Wheat | mitochondrion, plastid | 79.56 | 70.97 |
| KRH44155 | Soybean | cytosol | 29.81 | 34.52 |
| KRH47127 | Soybean | nucleus | 29.81 | 34.52 |
| KRH48684 | Soybean | cytosol, endoplasmic reticulum | 27.26 | 33.61 |
| KRH03228 | Soybean | nucleus | 30.49 | 29.73 |
| KRH20283 | Soybean | plastid | 29.64 | 29.69 |
| KRG97325 | Soybean | endoplasmic reticulum | 29.64 | 29.44 |
| KRH30661 | Soybean | endoplasmic reticulum | 28.11 | 29.2 |
| KRH57127 | Soybean | endoplasmic reticulum, nucleus | 30.32 | 29.09 |
| KRH42811 | Soybean | endoplasmic reticulum | 30.66 | 29.08 |
| KRG98124 | Soybean | endoplasmic reticulum | 28.28 | 29.07 |
| KRH58901 | Soybean | nucleus | 30.15 | 28.83 |
| KRH38030 | Soybean | endoplasmic reticulum | 29.81 | 28.64 |
| KRH31589 | Soybean | nucleus | 29.3 | 28.48 |
| KRH71800 | Soybean | plastid | 29.3 | 28.15 |
| KRH39630 | Soybean | nucleus | 25.55 | 27.93 |
| KRH03709 | Soybean | plastid | 28.79 | 27.7 |
| KRH74291 | Soybean | nucleus | 25.21 | 27.56 |
| KRG96540 | Soybean | cytosol, mitochondrion | 34.75 | 26.56 |
| KRH68277 | Soybean | nucleus | 34.75 | 26.09 |
| KRH51212 | Soybean | nucleus | 30.15 | 25.25 |
| KRH01937 | Soybean | nucleus | 30.15 | 25.07 |
| KRH56577 | Soybean | nucleus | 28.28 | 21.42 |
| KRG93254 | Soybean | endoplasmic reticulum | 28.28 | 21.39 |
| KRH77709 | Soybean | nucleus | 34.58 | 18.39 |
| KRH27757 | Soybean | nucleus | 34.58 | 18.34 |
| KRH36905 | Soybean | nucleus | 29.13 | 14.68 |
| KRH11875 | Soybean | endoplasmic reticulum | 29.3 | 14.32 |
Protein Annotations
| EntrezGene:100814127 | Gene3D:3.40.50.300 | MapMan:35.1 | EMBL:ACUP02002120 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom |
| EnsemblPlantsGene:GLYMA_03G236700 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004004 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009987 | GO:GO:0010501 | GO:GO:0016787 | GO:GO:0071013 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| UniProt:I1JRB6 | InterPro:IPR001650 | InterPro:IPR001878 | InterPro:IPR014001 | InterPro:IPR014014 | ProteinID:KRH68533.1 |
| EnsemblPlants:KRH68534 | ProteinID:KRH68534 | ProteinID:KRH68534.1 | ProteinID:KRH68535.1 | InterPro:P-loop_NTPase | PFAM:PF00098 |
| PFAM:PF00270 | PFAM:PF00271 | PFscan:PS50158 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51195 |
| PANTHER:PTHR24031 | PANTHER:PTHR24031:SF542 | InterPro:RNA_helicase_DEAD_Q_motif | SMART:SM00343 | SMART:SM00487 | SMART:SM00490 |
| SUPFAM:SSF52540 | SUPFAM:SSF57756 | UniParc:UPI000233A1BB | InterPro:Znf_CCHC | InterPro:Znf_CCHC_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr3:-:43663512..43668334
Molecular Weight (calculated)
65899.6 Da
IEP (calculated)
7.070
GRAVY (calculated)
-0.280
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEDDYVEYV PVAKRRALEA QKILQRKGKA SAVTDDDLEK QRVAETKPSL LVKASQLKRE QPEISVTEQI VQQEKEMIEN LSDRKTLMSV RELAKGITYT
101: EPLPTGWKPP LHVRRMSKKE CDLIRKQWHI IVDGGDIPPP IKNFKDMRFP EPVLKKLKAK GIVQPTPIQV QGLPVILSGR DMIGIAFTGS GKTLVFVLPM
201: IMMAMQEEIM MPIVPGEGPF GLIICPSREL ARQTYEVIEQ FLIPLKEAGY PELRPLLCIG GVDMRSQLDI VKKGVHIVVA TPGRLKDMLA KKKMNLDNCR
301: YLTLDEADRL VDLGFEDDIR EVFDHFKAQR QTLLFSATMP TKIQNFARSA LVKPIIVNVG RAGAANLDVI QEVEYVKQEA KIVYLLECLQ KTPPPVLIFC
401: ENKADVDDIH EYLLLKGVEA VAIHGGKDQE EREYAIAAFK AGKKDVLVAT DVASKGLDFP DIQHVINYDM PAEIENYVHR IGRTGRCGKT GIATTFINKN
501: QSETTLLDLK HLLQEAKQRI PPVLAELNDP MEDNEEITDI SGVKGCAYCG GLGHRIRDCP KLEHQKSMAI ANNRKDYFGS GGYRGEI
101: EPLPTGWKPP LHVRRMSKKE CDLIRKQWHI IVDGGDIPPP IKNFKDMRFP EPVLKKLKAK GIVQPTPIQV QGLPVILSGR DMIGIAFTGS GKTLVFVLPM
201: IMMAMQEEIM MPIVPGEGPF GLIICPSREL ARQTYEVIEQ FLIPLKEAGY PELRPLLCIG GVDMRSQLDI VKKGVHIVVA TPGRLKDMLA KKKMNLDNCR
301: YLTLDEADRL VDLGFEDDIR EVFDHFKAQR QTLLFSATMP TKIQNFARSA LVKPIIVNVG RAGAANLDVI QEVEYVKQEA KIVYLLECLQ KTPPPVLIFC
401: ENKADVDDIH EYLLLKGVEA VAIHGGKDQE EREYAIAAFK AGKKDVLVAT DVASKGLDFP DIQHVINYDM PAEIENYVHR IGRTGRCGKT GIATTFINKN
501: QSETTLLDLK HLLQEAKQRI PPVLAELNDP MEDNEEITDI SGVKGCAYCG GLGHRIRDCP KLEHQKSMAI ANNRKDYFGS GGYRGEI
001: MESIMEEADS YIEYVSVAER RAIAAQKILQ RKGKASELEE EADKEKLAEA KPSLLVQATQ LKRDVPEVSA TEQIILQEKE MMEHLSDKKT LMSVRELAKG
101: ITYTEPLLTG WKPPLHIRKM SSKQRDLIRK QWHIIVNGDD IPPPIKNFKD MKFPRPVLDT LKEKGIVQPT PIQVQGLPVI LAGRDMIGIA FTGSGKTLVF
201: VLPMIMIALQ EEMMMPIAAG EGPIGLIVCP SRELARQTYE VVEQFVAPLV EAGYPPLRSL LCIGGIDMRS QLEVVKRGVH IVVATPGRLK DMLAKKKMSL
301: DACRYLTLDE ADRLVDLGFE DDIREVFDHF KSQRQTLLFS ATMPTKIQIF ARSALVKPVT VNVGRAGAAN LDVIQEVEYV KQEAKIVYLL ECLQKTSPPV
401: LIFCENKADV DDIHEYLLLK GVEAVAIHGG KDQEDREYAI SSFKAGKKDV LVATDVASKG LDFPDIQHVI NYDMPAEIEN YVHRIGRTGR CGKTGIATTF
501: INKNQSETTL LDLKHLLQEA KQRIPPVLAE LNDPMEEAET IANASGVKGC AYCGGLGHRI RDCPKLEHQK SVAISNSRKD YFGSGGYRGE I
101: ITYTEPLLTG WKPPLHIRKM SSKQRDLIRK QWHIIVNGDD IPPPIKNFKD MKFPRPVLDT LKEKGIVQPT PIQVQGLPVI LAGRDMIGIA FTGSGKTLVF
201: VLPMIMIALQ EEMMMPIAAG EGPIGLIVCP SRELARQTYE VVEQFVAPLV EAGYPPLRSL LCIGGIDMRS QLEVVKRGVH IVVATPGRLK DMLAKKKMSL
301: DACRYLTLDE ADRLVDLGFE DDIREVFDHF KSQRQTLLFS ATMPTKIQIF ARSALVKPVT VNVGRAGAAN LDVIQEVEYV KQEAKIVYLL ECLQKTSPPV
401: LIFCENKADV DDIHEYLLLK GVEAVAIHGG KDQEDREYAI SSFKAGKKDV LVATDVASKG LDFPDIQHVI NYDMPAEIEN YVHRIGRTGR CGKTGIATTF
501: INKNQSETTL LDLKHLLQEA KQRIPPVLAE LNDPMEEAET IANASGVKGC AYCGGLGHRI RDCPKLEHQK SVAISNSRKD YFGSGGYRGE I
Arabidopsis Description
RH35DEAD-box ATP-dependent RNA helicase 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU46]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.