Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68534 | Soybean | cytosol | 98.81 | 98.98 |
| VIT_09s0002g08120.t01 | Wine grape | cytosol | 89.97 | 90.12 |
| CDY38671 | Canola | cytosol | 79.08 | 89.6 |
| PGSC0003DMT400036663 | Potato | cytosol | 89.46 | 89.3 |
| Solyc03g117440.2.1 | Tomato | cytosol, nucleus | 89.46 | 88.4 |
| PGSC0003DMT400073340 | Potato | cytosol | 88.44 | 88.29 |
| CDY61276 | Canola | cytosol | 77.89 | 88.25 |
| CDY39973 | Canola | cytosol | 77.72 | 88.22 |
| CDX87315 | Canola | cytosol | 77.38 | 87.84 |
| Os02t0150100-02 | Rice | cytosol | 68.71 | 87.83 |
| Solyc06g068280.2.1 | Tomato | extracellular, nucleus | 88.61 | 87.56 |
| Bra008471.1-P | Field mustard | cytosol | 82.48 | 86.15 |
| AT5G51280.1 | Thale cress | cytosol | 85.88 | 85.45 |
| Bra018133.1-P | Field mustard | cytosol | 84.86 | 84.86 |
| Bra035177.1-P | Field mustard | cytosol | 84.18 | 84.18 |
| CDX67949 | Canola | cytosol | 76.87 | 83.09 |
| GSMUA_Achr2P09160_001 | Banana | cytosol | 76.87 | 82.63 |
| AT4G33370.1 | Thale cress | cytosol | 75.51 | 81.92 |
| Bra003568.1-P | Field mustard | cytosol | 81.29 | 80.88 |
| Zm00001d047502_P001 | Maize | extracellular | 80.27 | 76.38 |
| EER92293 | Sorghum | cytosol | 80.27 | 76.38 |
| TraesCS3B01G141300.1 | Wheat | cytosol | 79.25 | 75.9 |
| HORVU5Hr1G048040.1 | Barley | plastid | 73.64 | 75.7 |
| CDX79384 | Canola | cytosol | 49.49 | 74.62 |
| TraesCS5D01G159000.1 | Wheat | cytosol | 75.34 | 72.86 |
| HORVU3Hr1G022710.1 | Barley | mitochondrion | 78.91 | 72.73 |
| TraesCS5B01G152200.1 | Wheat | cytosol | 75.17 | 72.58 |
| TraesCS5A01G153700.1 | Wheat | cytosol | 71.6 | 72.21 |
| Os06t0697200-00 | Rice | cytosol | 75.17 | 71.41 |
| GSMUA_Achr1P13820_001 | Banana | mitochondrion | 65.82 | 71.4 |
| TraesCS3A01G122100.1 | Wheat | mitochondrion, plastid | 79.42 | 70.97 |
| KRH44155 | Soybean | cytosol | 29.59 | 34.32 |
| KRH47127 | Soybean | nucleus | 29.59 | 34.32 |
| KRH48684 | Soybean | cytosol, endoplasmic reticulum | 27.04 | 33.4 |
| KRH20283 | Soybean | plastid | 29.76 | 29.86 |
| KRG97325 | Soybean | endoplasmic reticulum | 29.76 | 29.61 |
| KRH03228 | Soybean | nucleus | 30.27 | 29.57 |
| KRH42811 | Soybean | endoplasmic reticulum | 30.78 | 29.24 |
| KRH30661 | Soybean | endoplasmic reticulum | 27.89 | 29.03 |
| KRH58901 | Soybean | nucleus | 30.27 | 28.99 |
| KRH57127 | Soybean | endoplasmic reticulum, nucleus | 30.1 | 28.92 |
| KRG98124 | Soybean | endoplasmic reticulum | 28.06 | 28.9 |
| KRH31589 | Soybean | nucleus | 29.42 | 28.64 |
| KRH38030 | Soybean | endoplasmic reticulum | 29.76 | 28.64 |
| KRH71800 | Soybean | plastid | 29.25 | 28.15 |
| KRH39630 | Soybean | nucleus | 25.51 | 27.93 |
| KRH03709 | Soybean | plastid | 28.91 | 27.87 |
| KRH74291 | Soybean | nucleus | 25.17 | 27.56 |
| KRG96540 | Soybean | cytosol, mitochondrion | 34.35 | 26.3 |
| KRH68277 | Soybean | nucleus | 34.69 | 26.09 |
| KRH51212 | Soybean | nucleus | 30.27 | 25.39 |
| KRH01937 | Soybean | nucleus | 30.27 | 25.21 |
| KRH56577 | Soybean | nucleus | 28.06 | 21.29 |
| KRG93254 | Soybean | endoplasmic reticulum | 28.06 | 21.26 |
| KRH77709 | Soybean | nucleus | 34.52 | 18.39 |
| KRH27757 | Soybean | nucleus | 34.52 | 18.34 |
| KRH36905 | Soybean | nucleus | 29.25 | 14.76 |
| KRH11875 | Soybean | endoplasmic reticulum | 29.42 | 14.4 |
Protein Annotations
| EntrezGene:100819984 | Gene3D:3.40.50.300 | MapMan:35.1 | EMBL:ACUP02011954 | ncoils:Coil | InterPro:DEAD/DEAH_box_helicase_dom |
| EnsemblPlantsGene:GLYMA_19G082800 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003824 | GO:GO:0004004 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005730 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009987 | GO:GO:0010501 | GO:GO:0016787 | GO:GO:0071013 | InterPro:Helicase_ATP-bd | InterPro:Helicase_C |
| InterPro:IPR001650 | InterPro:IPR001878 | InterPro:IPR014001 | InterPro:IPR014014 | UniProt:K7MX92 | ProteinID:KRG94408.1 |
| EnsemblPlants:KRG94409 | ProteinID:KRG94409 | ProteinID:KRG94409.1 | ProteinID:KRG94410.1 | InterPro:P-loop_NTPase | PFAM:PF00098 |
| PFAM:PF00270 | PFAM:PF00271 | PFscan:PS50158 | PFscan:PS51192 | PFscan:PS51194 | PFscan:PS51195 |
| PANTHER:PTHR24031 | PANTHER:PTHR24031:SF542 | InterPro:RNA_helicase_DEAD_Q_motif | SMART:SM00343 | SMART:SM00487 | SMART:SM00490 |
| SUPFAM:SSF52540 | SUPFAM:SSF57756 | UniParc:UPI000233F456 | InterPro:Znf_CCHC | InterPro:Znf_CCHC_sf | SEG:seg |
Description
hypothetical protein
Coordinates
chr19:-:30018715..30021912
Molecular Weight (calculated)
65910.5 Da
IEP (calculated)
6.738
GRAVY (calculated)
-0.282
Length
588 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEEDDYVEY VPVAKRRALE AQNILQRKGK ASAATDDDLE KQRVAETKPS LLVKASQLKR EQPEISVTEQ IVQQEKEMIE NLSDRKTLMS VRELAKGITY
101: TEPLPTGWKP PLHVRRMSKK ECDLIRKQWH IIADGGDIPP PIKNFKDMRF PEPVLKKLKA KGIVQPTPIQ VQGLPVILSG RDMIGIAFTG SGKTLVFVLP
201: MIMVAMQEEI MMPIVPGEGP FGLIICPSRE LARQTFEVIE QFLIPLKEAG YPELRPLLCI GGVDMRSQLD IVKKGVHIVV ATPGRLKDML AKKKMNLDNC
301: RYLTLDEADR LVDLGFEDDI REVFDHFKAQ RQTLLFSATM PTKIQNFARS ALVKPIIVNV GRAGAANLDV IQEVEYVKQE AKIVYLLECL QKTPPPVLIF
401: CENKADVDDI HEYLLLKGVE AVAIHGGKDQ EEREYAIAAF KAGKKDVLVA TDVASKGLDF PDIQHVINYD MPAEIENYVH RIGRTGRCGK TGIATTFINK
501: NQSETTLLDL KHLLQEAKQR IPPVLAELND PMEDNEEITD ISGVKGCAYC GGLGHRIRDC PKLEHQKSMA IANNRKDYFG SGGYRGEI
101: TEPLPTGWKP PLHVRRMSKK ECDLIRKQWH IIADGGDIPP PIKNFKDMRF PEPVLKKLKA KGIVQPTPIQ VQGLPVILSG RDMIGIAFTG SGKTLVFVLP
201: MIMVAMQEEI MMPIVPGEGP FGLIICPSRE LARQTFEVIE QFLIPLKEAG YPELRPLLCI GGVDMRSQLD IVKKGVHIVV ATPGRLKDML AKKKMNLDNC
301: RYLTLDEADR LVDLGFEDDI REVFDHFKAQ RQTLLFSATM PTKIQNFARS ALVKPIIVNV GRAGAANLDV IQEVEYVKQE AKIVYLLECL QKTPPPVLIF
401: CENKADVDDI HEYLLLKGVE AVAIHGGKDQ EEREYAIAAF KAGKKDVLVA TDVASKGLDF PDIQHVINYD MPAEIENYVH RIGRTGRCGK TGIATTFINK
501: NQSETTLLDL KHLLQEAKQR IPPVLAELND PMEDNEEITD ISGVKGCAYC GGLGHRIRDC PKLEHQKSMA IANNRKDYFG SGGYRGEI
001: MESIMEEADS YIEYVSVAER RAIAAQKILQ RKGKASELEE EADKEKLAEA KPSLLVQATQ LKRDVPEVSA TEQIILQEKE MMEHLSDKKT LMSVRELAKG
101: ITYTEPLLTG WKPPLHIRKM SSKQRDLIRK QWHIIVNGDD IPPPIKNFKD MKFPRPVLDT LKEKGIVQPT PIQVQGLPVI LAGRDMIGIA FTGSGKTLVF
201: VLPMIMIALQ EEMMMPIAAG EGPIGLIVCP SRELARQTYE VVEQFVAPLV EAGYPPLRSL LCIGGIDMRS QLEVVKRGVH IVVATPGRLK DMLAKKKMSL
301: DACRYLTLDE ADRLVDLGFE DDIREVFDHF KSQRQTLLFS ATMPTKIQIF ARSALVKPVT VNVGRAGAAN LDVIQEVEYV KQEAKIVYLL ECLQKTSPPV
401: LIFCENKADV DDIHEYLLLK GVEAVAIHGG KDQEDREYAI SSFKAGKKDV LVATDVASKG LDFPDIQHVI NYDMPAEIEN YVHRIGRTGR CGKTGIATTF
501: INKNQSETTL LDLKHLLQEA KQRIPPVLAE LNDPMEEAET IANASGVKGC AYCGGLGHRI RDCPKLEHQK SVAISNSRKD YFGSGGYRGE I
101: ITYTEPLLTG WKPPLHIRKM SSKQRDLIRK QWHIIVNGDD IPPPIKNFKD MKFPRPVLDT LKEKGIVQPT PIQVQGLPVI LAGRDMIGIA FTGSGKTLVF
201: VLPMIMIALQ EEMMMPIAAG EGPIGLIVCP SRELARQTYE VVEQFVAPLV EAGYPPLRSL LCIGGIDMRS QLEVVKRGVH IVVATPGRLK DMLAKKKMSL
301: DACRYLTLDE ADRLVDLGFE DDIREVFDHF KSQRQTLLFS ATMPTKIQIF ARSALVKPVT VNVGRAGAAN LDVIQEVEYV KQEAKIVYLL ECLQKTSPPV
401: LIFCENKADV DDIHEYLLLK GVEAVAIHGG KDQEDREYAI SSFKAGKKDV LVATDVASKG LDFPDIQHVI NYDMPAEIEN YVHRIGRTGR CGKTGIATTF
501: INKNQSETTL LDLKHLLQEA KQRIPPVLAE LNDPMEEAET IANASGVKGC AYCGGLGHRI RDCPKLEHQK SVAISNSRKD YFGSGGYRGE I
Arabidopsis Description
RH35DEAD-box ATP-dependent RNA helicase 35 [Source:UniProtKB/Swiss-Prot;Acc:Q9LU46]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.