Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRG92033 | Soybean | nucleus | 94.58 | 94.37 |
VIT_13s0106g00640.t01 | Wine grape | nucleus | 70.72 | 69.36 |
Solyc11g007110.1.1 | Tomato | nucleus | 63.56 | 62.21 |
PGSC0003DMT400050190 | Potato | nucleus | 63.12 | 61.78 |
HORVU5Hr1G012830.1 | Barley | extracellular | 17.35 | 55.56 |
GSMUA_Achr11P... | Banana | nucleus | 53.36 | 54.91 |
Zm00001d016556_P001 | Maize | nucleus | 23.21 | 53.77 |
Zm00001d002863_P001 | Maize | nucleus | 23.21 | 53.77 |
PGSC0003DMT400085411 | Potato | nucleus | 19.74 | 52.6 |
GSMUA_Achr6P19370_001 | Banana | nucleus | 53.8 | 52.54 |
Zm00001d042021_P001 | Maize | nucleus | 20.39 | 51.37 |
Os09t0568000-01 | Rice | nucleus | 50.33 | 50.99 |
KXG35119 | Sorghum | nucleus | 51.63 | 50.64 |
TraesCS4A01G305400.1 | Wheat | nucleus | 49.89 | 49.68 |
HORVU6Hr1G045180.1 | Barley | nucleus | 27.77 | 49.42 |
Zm00001d005338_P005 | Maize | nucleus | 49.24 | 49.03 |
TraesCS4D01G007600.1 | Wheat | nucleus | 49.89 | 48.32 |
TraesCS4B01G007100.1 | Wheat | nucleus | 49.46 | 48.31 |
HORVU4Hr1G001350.18 | Barley | nucleus | 49.89 | 43.56 |
Zm00001d019875_P001 | Maize | nucleus | 48.16 | 43.11 |
KRH33305 | Soybean | nucleus | 17.14 | 40.51 |
Zm00001d030359_P001 | Maize | nucleus | 22.99 | 39.11 |
KRH66702 | Soybean | nucleus | 28.85 | 37.36 |
KRG95052 | Soybean | nucleus | 28.2 | 36.62 |
KRH71688 | Soybean | nucleus | 27.55 | 35.77 |
Zm00001d036628_P001 | Maize | cytosol | 18.87 | 35.66 |
KRH33128 | Soybean | nucleus | 27.11 | 35.51 |
Protein Annotations
EntrezGene:100797761 | Gene3D:3.30.1370.50 | MapMan:35.2 | EMBL:ACUP02006626 | EnsemblPlantsGene:GLYMA_10G203800 | GO:GO:0003674 |
GO:GO:0003676 | GO:GO:0005488 | UniProt:I1LCT2 | InterPro:IPR001374 | InterPro:IPR024771 | InterPro:IPR036867 |
EnsemblPlants:KRH34752 | ProteinID:KRH34752 | ProteinID:KRH34752.1 | ProteinID:KRH34753.1 | PFAM:PF01424 | PFAM:PF12752 |
PFscan:PS51061 | PFscan:PS51673 | PANTHER:PTHR15672 | PANTHER:PTHR15672:SF23 | InterPro:R3H_dom | InterPro:R3H_dom_sf |
SMART:SM00393 | SUPFAM:SSF82708 | InterPro:SUZ | UniParc:UPI000233D67D | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:+:43504831..43511598
Molecular Weight (calculated)
51978.6 Da
IEP (calculated)
6.965
GRAVY (calculated)
-0.865
Length
461 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGSAEDLGA PESWEVADLD ESMNRLNLMV FSNNDSKQPH QRLADYNDDD APLPPPPSSS CDEVSDDAIN QVDQFLREAI QNPRERLSIL RMEQDVENFI
101: RDPTQQQLEF KQLPTSYLRL AAHRVAQHYS LQSMVLLDNS LPDGSGSRII VRKTSECKLP VIRLADIPVK LSPENSAVMK VAIKQRPQKW TQILSNANSN
201: SMKNNSSKSV EERKEEYNRA RARIFNSSNN DGTVGGKPEC ESRQQDNSLH SSLVVPRVED KSASVSDVTS GRGLVESSTN TNRARSRIEK EPVGRYRQNN
301: RVAIFRDREV DRKDPDYDRN YDRYMQRFDP GFGFNGGSYA IQPMYTAVLN YKTEFPQLGS THRPHLSAEH QPRPLPQHIS GPWAAQSAPA GIGYGHPETM
401: MPPFNPNQVG AHSSSAMYLH SSQYPCQRPG MPFIHHEHVH QPFAQSHQPP PDASFGLARP R
101: RDPTQQQLEF KQLPTSYLRL AAHRVAQHYS LQSMVLLDNS LPDGSGSRII VRKTSECKLP VIRLADIPVK LSPENSAVMK VAIKQRPQKW TQILSNANSN
201: SMKNNSSKSV EERKEEYNRA RARIFNSSNN DGTVGGKPEC ESRQQDNSLH SSLVVPRVED KSASVSDVTS GRGLVESSTN TNRARSRIEK EPVGRYRQNN
301: RVAIFRDREV DRKDPDYDRN YDRYMQRFDP GFGFNGGSYA IQPMYTAVLN YKTEFPQLGS THRPHLSAEH QPRPLPQHIS GPWAAQSAPA GIGYGHPETM
401: MPPFNPNQVG AHSSSAMYLH SSQYPCQRPG MPFIHHEHVH QPFAQSHQPP PDASFGLARP R
001: MDTALTSESG CAVIADKGFN VDPFLVEALQ NPRHRLTILR MELDVQRFLQ SPDQQQFEFQ HFPTSYLRFA AHRVANHYGL ITSVRDGGAD GNESRIVVTK
101: SSDSRFPAAR LSEIPVKQSE TGKFEHMKVV IKPRPTKGSG MEGDELKGGL LKSVEERKED YDRARARIFN GLVNIDCNDS SSETNPWRVN CSSSRDENQV
201: LKNGNIEADK NNISRKSNPA SRIAILRDRE KDRYDPDYDR SNYRYISNLP VDQNLCVAHF NIQTMGTPIY DMGFRGYSPT APPSLNLGQH SVMSPCVTTG
301: LNQPSRDAAM YMQWPNAAAV MYTHSYDHFR NSPFQAQFYP QPLSFDYMQN R
101: SSDSRFPAAR LSEIPVKQSE TGKFEHMKVV IKPRPTKGSG MEGDELKGGL LKSVEERKED YDRARARIFN GLVNIDCNDS SSETNPWRVN CSSSRDENQV
201: LKNGNIEADK NNISRKSNPA SRIAILRDRE KDRYDPDYDR SNYRYISNLP VDQNLCVAHF NIQTMGTPIY DMGFRGYSPT APPSLNLGQH SVMSPCVTTG
301: LNQPSRDAAM YMQWPNAAAV MYTHSYDHFR NSPFQAQFYP QPLSFDYMQN R
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:O22209]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.