Factsheet for Os02t0130100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os07t0100200-01
Os10t0100700-01
Os10t0191600-00
Os11t0708500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G60540.1	Os07t0100200-01	AT2G38230.1	16766694
AT5G60540.1	Os10t0100700-01	AT2G38230.1	16766694
AT5G60540.1	Os10t0191600-00	AT2G38230.1	16766694
AT5G60540.1	Os11t0708500-01	AT2G38230.1	16766694
AT5G60540.1	Os07t0100200-01	AT5G01410.1	16766694
AT5G60540.1	Os10t0100700-01	AT5G01410.1	16766694
AT5G60540.1	Os10t0191600-00	AT5G01410.1	16766694
AT5G60540.1	Os11t0708500-01	AT5G01410.1	16766694

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG29380	Sorghum	cytosol	89.41	89.41
Zm00001d053981_P002	Maize	cytosol	89.02	87.64
TraesCS6A01G084600.1	Wheat	cytosol	86.67	86.33
HORVU6Hr1G015450.1	Barley	cytosol, mitochondrion	86.27	85.94
TraesCSU01G113600.1	Wheat	cytosol, mitochondrion	86.27	85.94
TraesCS6B01G117600.1	Wheat	cytosol	86.27	85.94
TraesCS4D01G289800.1	Wheat	plastid	89.8	80.63
TraesCS4B01G291200.1	Wheat	cytosol	89.41	73.31
GSMUA_Achr7P07370_001	Banana	cytosol	70.2	70.75
VIT_06s0004g03000.t01	Wine grape	cytosol	67.45	68.25
KRH65766	Soybean	cytosol	67.06	67.32
KRH75883	Soybean	cytosol	67.45	66.67
AT5G60540.1	Thale cress	cytosol	64.31	64.31
HORVU4Hr1G075840.3	Barley	mitochondrion	89.02	64.12
CDY31539	Canola	cytosol	63.14	63.89
Bra002473.1-P	Field mustard	cytosol	63.14	63.89
PGSC0003DMT400020828	Potato	cytosol	62.35	63.35
Solyc11g069290.1.1	Tomato	plastid	62.35	63.35
TraesCS4A01G013200.2	Wheat	cytosol	68.24	61.92
CDY09196	Canola	cytosol	56.08	61.9
CDX80159	Canola	cytosol	48.63	60.49
KRH75832	Soybean	cytosol	21.57	56.7

Protein Annotations

KEGG:00220+3.5.1.2	KEGG:00250+3.5.1.2	KEGG:00471+3.5.1.2	KEGG:00750+4.3.3.6	Gene3D:3.40.50.880	EntrezGene:4328188
MapMan:7.7.1.2	EMBL:AK121866	ProteinID:BAD07735.1	ProteinID:BAD07990.1	ProteinID:BAF07696.1	ProteinID:BAS76803.1
InterPro:Class_I_gatase-like	ProteinID:EAZ21612.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004359	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0008150	GO:GO:0008152	GO:GO:0008614	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0016787	GO:GO:0042819	GO:GO:0042823	GO:GO:0046982	GO:GO:1903600	InterPro:IPR002161
InterPro:IPR029062	HAMAP:MF_01615	EnsemblPlantsGene:Os02g0130100	EnsemblPlants:Os02t0130100-01	PFAM:PF01174	PIRSF:PIRSF005639
ScanProsite:PS01236	PFscan:PS51130	PANTHER:PTHR31559	InterPro:PdxT/SNO	InterPro:PdxT/SNO_CS	UniProt:Q6Z6Y1
SUPFAM:SSF52317	TIGRFAMs:TIGR03800	UniParc:UPI00002367C1	RefSeq:XP_015623150.1	SEG:seg	:

Description

SNO glutamine amidotransferase family protein. (Os02t0130100-01)

Coordinates

chr2:-:1566154..1569479

Molecular Weight (calculated)

27491.7 Da

IEP (calculated)

5.156

GRAVY (calculated)

-0.092

Length

255 amino acids

Sequence
(BLAST)

001: MAVVGVLALQ GSFNEHLAAL RRIGVRGVEV RKPEQLQGLD SLIIPGGEST TMAKLANYHN LFPALREFVG TGRPVWGTCA GLIFLANKAV GQKSGGQELI
101: GGLDCTVHRN FFGSQLQSFE TELSVPMLAE KEGGSDTCRG VFIRAPAILD VGSNVEVLAD CPVPSDRPSI TIASGEGVEE EVYSKDRVIV AVRQGNILAT
201: AFHPELTSDS RWHRFFLDMD KESDTKAFSA LSLSSSSRDT QDGSKNKPLD LPIFE

Best Arabidopsis Sequence Match ( AT5G60540.1 )
(BLAST)

001: MTVGVLALQG SFNEHIAALR RLGVQGVEIR KADQLLTVSS LIIPGGESTT MAKLAEYHNL FPALREFVKM GKPVWGTCAG LIFLADRAVG QKEGGQELVG
101: GLDCTVHRNF FGSQIQSFEA DILVPQLTSQ EGGPETYRGV FIRAPAVLDV GPDVEVLADY PVPSNKVLYS SSTVQIQEED ALPETKVIVA VKQGNLLATA
201: FHPELTADTR WHSYFIKMTK EIEQGASSSS SKTIVSVGET SAGPEPAKPD LPIFQ

Arabidopsis Description

PDX2PDX2 [Source:UniProtKB/TrEMBL;Acc:A0A178UA48]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.