Factsheet for Os10t0191600-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 1
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0130100-01
Os07t0100200-01
Os10t0100700-01
Os10t0191600-00
Os11t0708500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38230.1	Os07t0100200-01	AT5G01410.1	16766694
AT2G38230.1	Os10t0100700-01	AT5G01410.1	16766694
AT2G38230.1	Os10t0191600-00	AT5G01410.1	16766694
AT2G38230.1	Os11t0708500-01	AT5G01410.1	16766694
AT2G38230.1	Os02t0130100-01	AT5G60540.1	16766694
AT5G01410.1	Os07t0100200-01	AT2G38230.1	16766694
AT5G01410.1	Os10t0100700-01	AT2G38230.1	16766694
AT5G01410.1	Os10t0191600-00	AT2G38230.1	16766694
AT5G01410.1	Os11t0708500-01	AT2G38230.1	16766694
AT5G01410.1	Os07t0100200-01	AT5G01410.1	16766694
AT5G01410.1	Os10t0100700-01	AT5G01410.1	16766694
AT5G01410.1	Os10t0191600-00	AT5G01410.1	16766694
AT5G01410.1	Os11t0708500-01	AT5G01410.1	16766694
AT5G01410.1	Os07t0100200-01	AT5G01410.1	21798944
AT5G01410.1	Os10t0100700-01	AT5G01410.1	21798944
AT5G01410.1	Os10t0191600-00	AT5G01410.1	21798944
AT5G01410.1	Os11t0708500-01	AT5G01410.1	21798944
AT5G01410.1	Os02t0130100-01	AT5G60540.1	16766694

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P31880_001	Banana	cytosol	49.19	32.85
CDX93320	Canola	cytosol	50.81	32.53
Os10t0100700-01	Rice	plasma membrane	51.89	30.67
Zm00001d018633_P001	Maize	cytosol	52.43	30.6
Os07t0100200-01	Rice	plasma membrane	52.43	30.5
Bra005687.1-P	Field mustard	cytosol	50.81	30.42
Bra028901.1-P	Field mustard	cytosol	50.81	30.42
CDX80774	Canola	cytosol	50.81	30.42
CDY04839	Canola	cytosol	50.81	30.42
CDY11202	Canola	cytosol	50.81	30.42
HORVU2Hr1G065120.1	Barley	cytosol	51.89	30.38
Zm00001d007936_P001	Maize	cytosol	51.89	30.28
OQU88300	Sorghum	cytosol	51.89	30.28
AT5G01410.1	Thale cress	cytosol	50.27	30.1
TraesCS2D01G267800.1	Wheat	cytosol	50.81	29.75
TraesCS2B01G287600.1	Wheat	cytosol	50.81	29.75
PGSC0003DMT400078045	Potato	cytosol	49.19	29.45
Solyc06g081980.1.1	Tomato	extracellular, nucleus, plastid, unclear	49.19	29.45
KRH11075	Soybean	endoplasmic reticulum, nucleus	49.19	29.26
KRH21198	Soybean	endoplasmic reticulum	49.19	29.26
VIT_06s0004g06640.t01	Wine grape	cytosol	52.43	28.78
AT2G38230.1	Thale cress	cytosol	47.57	28.48
CDY18400	Canola	cytosol	38.92	27.27
Os11t0708500-01	Rice	plasma membrane	52.43	26.72
TraesCS2A01G268800.1	Wheat	plastid	50.81	24.35
Zm00001d018632_P001	Maize	extracellular	52.43	23.49
GSMUA_AchrUn_...	Banana	cytosol	28.65	20.7
GSMUA_Achr1P25530_001	Banana	cytosol	27.57	19.92
GSMUA_AchrUn_...	Banana	cytosol	28.11	17.63
GSMUA_Achr1P27650_001	Banana	cytosol	1.08	2.41
AT2G38210.1	Thale cress	cytosol, peroxisome, plastid	0.54	1.27

Protein Annotations

KEGG:00750+4.3.3.6	Gene3D:3.20.20.70	MapMan:7.7.1.1	UniProt:A0A0N7KRJ5	InterPro:Aldolase_TIM	ProteinID:BAT10194.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0004518	GO:GO:0004526	GO:GO:0004540
GO:GO:0006139	GO:GO:0008033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016070	GO:GO:0016787	GO:GO:0042819	GO:GO:0042823	GO:GO:0090501	GO:GO:0090502
InterPro:IPR001852	InterPro:IPR013785	EnsemblPlantsGene:Os10g0191600	EnsemblPlants:Os10t0191600-00	PFAM:PF01680	ScanProsite:PS01235
PFscan:PS51129	PANTHER:PTHR31829	InterPro:PdxS/SNZ	InterPro:PdxS/SNZ_N	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366
UniParc:UPI0003939ADB	SEG:seg	:	:	:	:

Description

Similar to 006-203-B11, full insert sequence. (Os10t0191600-00)

Coordinates

chr10:-:6385254..6386050

Molecular Weight (calculated)

20518.8 Da

IEP (calculated)

9.694

GRAVY (calculated)

-0.357

Length

185 amino acids

Sequence
(BLAST)

001: GTSNVVEAVR HVRSIMGEIR TLRDMDDDEV FAYAKRIAAP YDLVMQTKQL GRLPVVLFAA GGVATPADAA LMMQLGCDGI FVGSSIFKSG DHARHARTIV
101: QAITHCRSLR PSTLPPRRPR WHTFAVELCP VCRDREREEE MNGEKERKKK NGEREIDKWA NLSLTKVSLS ILTGNNKIMG GASNS

Best Arabidopsis Sequence Match ( AT5G01410.2 )
(BLAST)

001: MEGTGVVAVY GNGAITEAKK SPFSVKVGLA QMLRGGVIMD VVNAEQARIA EEAGACAVMA LERVPADIRA QGGVARMSDP QMIKEIKQAV TIPVMAKARI
101: GHFVEAQILE AIGIDYIDES EVLTLADEDH HINKHNFRIP FVCGCRNLGE ALRRIREGAA MIRTKGEAGT GNIIEAVRHV RSVNGDIRVL RNMDDDEVFT
201: FAKKLAAPYD LVMQTKQLGR LPVVQFAAGG VATPADAALM MQLGCDGVFV GSGIFKSGDP ARRARAIVQA VTHYSDPEML VEVSCGLGEA MVGINLNDEK
301: VERFANRSE

Arabidopsis Description

PDX13RSR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UIV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.