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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • peroxisome 1
  • mitochondrion 1
  • cytosol 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU88300 Sorghum cytosol 96.53 96.53
Zm00001d007936_P001 Maize cytosol 95.9 95.9
Os07t0100200-01 Rice plasma membrane 93.69 93.4
TraesCS2D01G267800.1 Wheat cytosol 90.22 90.51
HORVU2Hr1G065120.1 Barley cytosol 90.22 90.51
GSMUA_Achr8P31880_001 Banana cytosol 78.86 90.25
TraesCS4D01G133600.1 Wheat cytosol 89.27 90.13
Os10t0100700-01 Rice plasma membrane 88.96 90.1
TraesCS2B01G287600.1 Wheat cytosol 89.59 89.87
GSMUA_Achr1P25530_001 Banana cytosol 72.56 89.84
TraesCS4B01G138900.1 Wheat cytosol 88.96 89.81
GSMUA_AchrUn_... Banana cytosol 71.92 89.06
HORVU4Hr1G027040.2 Barley cytosol, peroxisome 88.64 88.92
TraesCS4A01G178700.1 Wheat cytosol 88.01 88.85
KRH11075 Soybean endoplasmic reticulum, nucleus 84.54 86.17
KRH21198 Soybean endoplasmic reticulum 84.23 85.85
CDY11202 Canola cytosol 82.97 85.11
CDY04839 Canola cytosol 82.97 85.11
Bra028901.1-P Field mustard cytosol 82.97 85.11
Bra005687.1-P Field mustard cytosol 82.97 85.11
PGSC0003DMT400078045 Potato cytosol 82.97 85.11
CDX80774 Canola cytosol 82.65 84.79
Solyc06g081980.1.1 Tomato extracellular, nucleus, plastid, unclear 82.65 84.79
AT5G01410.1 Thale cress cytosol 82.33 84.47
CDX93320 Canola cytosol 75.71 83.05
AT2G38230.1 Thale cress cytosol 80.13 82.2
CDY18400 Canola cytosol 64.67 77.65
VIT_06s0004g06640.t01 Wine grape cytosol 82.33 77.45
Zm00001d018632_P001 Maize extracellular 97.79 75.06
AT2G38210.1 Thale cress cytosol, peroxisome, plastid 18.61 74.68
GSMUA_AchrUn_... Banana cytosol 69.4 74.58
Os11t0708500-01 Rice plasma membrane 84.86 74.1
TraesCS2A01G268800.1 Wheat plastid 90.22 74.09
GSMUA_Achr1P27650_001 Banana cytosol 13.88 53.01
Os10t0191600-00 Rice plasma membrane 30.6 52.43
Protein Annotations
KEGG:00750+4.3.3.6Gene3D:3.20.20.70MapMan:7.7.1.1InterPro:Aldolase_TIMUniProt:B4FRZ2EMBL:BT039880
EMBL:BT040873EMBL:BT042881EMBL:EU952346GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0042819GO:GO:0042823InterPro:IPR001852
InterPro:IPR013785HAMAP:MF_01824ProteinID:ONM50982.1PFAM:PF01680PIRSF:PIRSF029271ScanProsite:PS01235
PFscan:PS51129PANTHER:PTHR31829InterPro:PdxS/SNZInterPro:PdxS/SNZ_NInterPro:RibuloseP-bd_barrelSUPFAM:SSF51366
TIGRFAMs:TIGR00343UniParc:UPI0000E6487AEnsemblPlantsGene:Zm00001d018633EnsemblPlants:Zm00001d018633_P001EnsemblPlants:Zm00001d018633_T001SEG:seg
Description
Pyridoxal 5'-phosphate synthase-like subunit PDX1.2
Coordinates
chr7:+:1389242..1390195
Molecular Weight (calculated)
33627.6 Da
IEP (calculated)
6.520
GRAVY (calculated)
0.028
Length
317 amino acids
Sequence
(BLAST)
001: MASDGSGVVT VYGSNGAELL EPSKQPKSAT FSVKVGLAQM LRGGVIMDVV TPEQARLAEE AGACAVMALE RVPADIRAQG GVARMSDPGL IRDIKRAVTI
101: PVMAKARIGH FVEAQILEAV GVDYVDESEV LTPADDAHHI NKHNFRVPFV CGCRDLGEAL RRVREGAAMI RTKGEAGTGN VVEAVRHVRS VMGDVRALRS
201: MDDDEVFAYA KRIAAPYDLV MQTKQLGRLP VVQFAAGGVA TPADAALMMQ LGCDGVFVGS GIFKSGDPAR RARAIVQAVT HYSDPTILAD VSTGLGEAMV
301: GINLNDPKVE RYAARSE
Best Arabidopsis Sequence Match ( AT5G01410.2 )
(BLAST)
001: MEGTGVVAVY GNGAITEAKK SPFSVKVGLA QMLRGGVIMD VVNAEQARIA EEAGACAVMA LERVPADIRA QGGVARMSDP QMIKEIKQAV TIPVMAKARI
101: GHFVEAQILE AIGIDYIDES EVLTLADEDH HINKHNFRIP FVCGCRNLGE ALRRIREGAA MIRTKGEAGT GNIIEAVRHV RSVNGDIRVL RNMDDDEVFT
201: FAKKLAAPYD LVMQTKQLGR LPVVQFAAGG VATPADAALM MQLGCDGVFV GSGIFKSGDP ARRARAIVQA VTHYSDPEML VEVSCGLGEA MVGINLNDEK
301: VERFANRSE
Arabidopsis Description
PDX13RSR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UIV6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.