Factsheet for HORVU2Hr1G065120.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
vacuole 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G065120.1
HORVU4Hr1G027040.2
HORVU4Hr1G075840.3
HORVU6Hr1G015450.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38230.1	HORVU2Hr1G065120.1	AT5G01410.1	16766694
AT2G38230.1	HORVU4Hr1G027040.2	AT5G01410.1	16766694
AT2G38230.1	HORVU4Hr1G075840.3	AT5G60540.1	16766694
AT2G38230.1	HORVU6Hr1G015450.1	AT5G60540.1	16766694
AT5G01410.1	HORVU2Hr1G065120.1	AT2G38230.1	16766694
AT5G01410.1	HORVU4Hr1G027040.2	AT2G38230.1	16766694
AT5G01410.1	HORVU2Hr1G065120.1	AT5G01410.1	16766694
AT5G01410.1	HORVU4Hr1G027040.2	AT5G01410.1	16766694
AT5G01410.1	HORVU2Hr1G065120.1	AT5G01410.1	21798944
AT5G01410.1	HORVU4Hr1G027040.2	AT5G01410.1	21798944
AT5G01410.1	HORVU4Hr1G075840.3	AT5G60540.1	16766694
AT5G01410.1	HORVU6Hr1G015450.1	AT5G60540.1	16766694

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G287600.1	Wheat	cytosol	98.73	98.73
TraesCS2D01G267800.1	Wheat	cytosol	95.89	95.89
Zm00001d018633_P001	Maize	cytosol	90.51	90.22
OQU88300	Sorghum	cytosol	89.56	89.27
KRH21198	Soybean	endoplasmic reticulum	87.66	89.07
Zm00001d007936_P001	Maize	cytosol	89.24	88.96
PGSC0003DMT400078045	Potato	cytosol	86.39	88.35
KRH11075	Soybean	endoplasmic reticulum, nucleus	86.71	88.1
GSMUA_Achr8P31880_001	Banana	cytosol	77.22	88.09
Solyc06g081980.1.1	Tomato	extracellular, nucleus, plastid, unclear	86.08	88.03
HORVU4Hr1G027040.2	Barley	cytosol, peroxisome	87.66	87.66
GSMUA_AchrUn_...	Banana	cytosol	70.89	87.5
GSMUA_Achr1P25530_001	Banana	cytosol	70.89	87.5
AT5G01410.1	Thale cress	cytosol	85.44	87.38
Bra005687.1-P	Field mustard	cytosol	85.44	87.38
Bra028901.1-P	Field mustard	cytosol	85.44	87.38
CDY11202	Canola	cytosol	85.44	87.38
CDY04839	Canola	cytosol	85.44	87.38
CDX80774	Canola	cytosol	85.13	87.06
CDX93320	Canola	cytosol	79.43	86.85
AT2G38230.1	Thale cress	cytosol	83.86	85.76
CDY18400	Canola	cytosol	68.67	82.2
AT2G38210.1	Thale cress	cytosol, peroxisome, plastid	20.25	81.01
VIT_06s0004g06640.t01	Wine grape	cytosol	85.44	80.12
TraesCS2A01G268800.1	Wheat	plastid	95.89	78.5
GSMUA_AchrUn_...	Banana	cytosol	68.35	73.22
Zm00001d018632_P001	Maize	extracellular	90.19	69.01
Os10t0191600-00	Rice	plasma membrane	30.38	51.89
GSMUA_Achr1P27650_001	Banana	cytosol	12.66	48.19

Protein Annotations

KEGG:00750+4.3.3.6	Gene3D:3.20.20.70	MapMan:7.7.1.1	EMBL:AK362069	InterPro:Aldolase_TIM	UniProt:F2DDV2
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0042819	GO:GO:0042823	EnsemblPlantsGene:HORVU2Hr1G065120	EnsemblPlants:HORVU2Hr1G065120.1	InterPro:IPR001852	InterPro:IPR013785
HAMAP:MF_01824	PFAM:PF01680	PIRSF:PIRSF029271	ScanProsite:PS01235	PFscan:PS51129	PANTHER:PTHR31829
InterPro:PdxS/SNZ	InterPro:PdxS/SNZ_N	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366	TIGRFAMs:TIGR00343	UniParc:UPI0002006088
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DDV2]

Coordinates

chrchr2H:+:446315279..446319114

Molecular Weight (calculated)

33451.3 Da

IEP (calculated)

6.257

GRAVY (calculated)

0.051

Length

316 amino acids

Sequence
(BLAST)

001: MASDGSGVVT VYGSGNNGAG TQLEPKSSPF SVKVGLAQML RGGVIMDVVN AEQARIAEEA GACAVMALER VPADIRAQGG VARMSDPGLI REIKRAVTIP
101: VMAKARIGHF VEAQILESIG VDYVDESEVL TLADDAHHIN KHNFRVPFVC GCRNLGEALR RIREGAAMIR TKGEAGTGNV VEAVRHVRSV MGDVRALRSM
201: DDDEVFSYAK SIAAPYDLVM QTKQLGRLPV VQFAAGGVAT PADAALMMQL GCDGVFVGSG IFKSGDPARR ARAIVQAVTH YSDPNVLAEV SCDLGEAMVG
301: INLSDPKVER FAARSE

Best Arabidopsis Sequence Match ( AT5G01410.2 )
(BLAST)

001: MEGTGVVAVY GNGAITEAKK SPFSVKVGLA QMLRGGVIMD VVNAEQARIA EEAGACAVMA LERVPADIRA QGGVARMSDP QMIKEIKQAV TIPVMAKARI
101: GHFVEAQILE AIGIDYIDES EVLTLADEDH HINKHNFRIP FVCGCRNLGE ALRRIREGAA MIRTKGEAGT GNIIEAVRHV RSVNGDIRVL RNMDDDEVFT
201: FAKKLAAPYD LVMQTKQLGR LPVVQFAAGG VATPADAALM MQLGCDGVFV GSGIFKSGDP ARRARAIVQA VTHYSDPEML VEVSCGLGEA MVGINLNDEK
301: VERFANRSE

Arabidopsis Description

PDX13RSR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UIV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.