Factsheet for HORVU4Hr1G027040.2

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G065120.1
HORVU4Hr1G027040.2
HORVU4Hr1G075840.3
HORVU6Hr1G015450.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G38230.1	HORVU2Hr1G065120.1	AT5G01410.1	16766694
AT2G38230.1	HORVU4Hr1G027040.2	AT5G01410.1	16766694
AT2G38230.1	HORVU4Hr1G075840.3	AT5G60540.1	16766694
AT2G38230.1	HORVU6Hr1G015450.1	AT5G60540.1	16766694
AT5G01410.1	HORVU2Hr1G065120.1	AT2G38230.1	16766694
AT5G01410.1	HORVU4Hr1G027040.2	AT2G38230.1	16766694
AT5G01410.1	HORVU2Hr1G065120.1	AT5G01410.1	16766694
AT5G01410.1	HORVU4Hr1G027040.2	AT5G01410.1	16766694
AT5G01410.1	HORVU2Hr1G065120.1	AT5G01410.1	21798944
AT5G01410.1	HORVU4Hr1G027040.2	AT5G01410.1	21798944
AT5G01410.1	HORVU4Hr1G075840.3	AT5G60540.1	16766694
AT5G01410.1	HORVU6Hr1G015450.1	AT5G60540.1	16766694

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G133600.1	Wheat	cytosol	98.1	98.73
TraesCS4B01G138900.1	Wheat	cytosol	97.47	98.09
TraesCS4A01G178700.1	Wheat	cytosol	96.2	96.82
Zm00001d018633_P001	Maize	cytosol	88.92	88.64
Zm00001d007936_P001	Maize	cytosol	88.29	88.01
OQU88300	Sorghum	cytosol	88.29	88.01
HORVU2Hr1G065120.1	Barley	cytosol	87.66	87.66
GSMUA_AchrUn_...	Banana	cytosol	70.57	87.11
GSMUA_Achr1P25530_001	Banana	cytosol	69.94	86.33
GSMUA_Achr8P31880_001	Banana	cytosol	75.63	86.28
Bra028901.1-P	Field mustard	cytosol	83.86	85.76
CDY04839	Canola	cytosol	83.86	85.76
KRH11075	Soybean	endoplasmic reticulum, nucleus	84.18	85.53
CDY11202	Canola	cytosol	83.54	85.44
Bra005687.1-P	Field mustard	cytosol	83.54	85.44
CDX80774	Canola	cytosol	83.54	85.44
KRH21198	Soybean	endoplasmic reticulum	83.86	85.21
AT5G01410.1	Thale cress	cytosol	83.23	85.11
PGSC0003DMT400078045	Potato	cytosol	83.23	85.11
Solyc06g081980.1.1	Tomato	extracellular, nucleus, plastid, unclear	82.91	84.79
CDX93320	Canola	cytosol	76.58	83.74
AT2G38230.1	Thale cress	cytosol	81.65	83.5
CDY18400	Canola	cytosol	66.14	79.17
VIT_06s0004g06640.t01	Wine grape	cytosol	82.59	77.45
AT2G38210.1	Thale cress	cytosol, peroxisome, plastid	19.3	77.22
Os11t0708500-01	Rice	plasma membrane	86.39	75.21
GSMUA_AchrUn_...	Banana	cytosol	68.04	72.88
Zm00001d018632_P001	Maize	extracellular	88.29	67.55
GSMUA_Achr1P27650_001	Banana	cytosol	12.97	49.4

Protein Annotations

KEGG:00750+4.3.3.6	Gene3D:3.20.20.70	MapMan:7.7.1.1	UniProt:A0A287NMU1	EMBL:AK367625	EMBL:AK370502
InterPro:Aldolase_TIM	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0042819	GO:GO:0042823	EnsemblPlantsGene:HORVU4Hr1G027040	EnsemblPlants:HORVU4Hr1G027040.2	InterPro:IPR001852
InterPro:IPR013785	HAMAP:MF_01824	PFAM:PF01680	PIRSF:PIRSF029271	ScanProsite:PS01235	PFscan:PS51129
PANTHER:PTHR31829	InterPro:PdxS/SNZ	InterPro:PdxS/SNZ_N	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366	TIGRFAMs:TIGR00343
UniParc:UPI000B461AF0	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr4H:-:164178537..164179730

Molecular Weight (calculated)

33465.5 Da

IEP (calculated)

6.790

GRAVY (calculated)

0.116

Length

316 amino acids

Sequence
(BLAST)

001: ESMASDGVVA LYGNNKAVVE PTAKPAAATF SVKVGLAQML RGGVIMDVVT AEQARLAEEA GACAVMALER VPADIRAQGG VARMSDPALI RDIKRAVTIP
101: VMAKARIGHF VEAQILEAIG VDYVDESEVL TLADDAHHIN KHNFRVPFVC GCRNLGEALR RIREGAAMIR TKGEAGTGNV VEAVRHVRSV MGAVRALRNM
201: DDDEVFSYAK QIAAPYDLVM QTKQLGRLPV VQFAAGGVAT PADAALMMQL GCDGVFVGSG IFKSGDPSRR ARAIVQAVTH YSDPEILANV SAGLGEAMVG
301: INLSDPNVER FAARSQ

Best Arabidopsis Sequence Match ( AT5G01410.2 )
(BLAST)

001: MEGTGVVAVY GNGAITEAKK SPFSVKVGLA QMLRGGVIMD VVNAEQARIA EEAGACAVMA LERVPADIRA QGGVARMSDP QMIKEIKQAV TIPVMAKARI
101: GHFVEAQILE AIGIDYIDES EVLTLADEDH HINKHNFRIP FVCGCRNLGE ALRRIREGAA MIRTKGEAGT GNIIEAVRHV RSVNGDIRVL RNMDDDEVFT
201: FAKKLAAPYD LVMQTKQLGR LPVVQFAAGG VATPADAALM MQLGCDGVFV GSGIFKSGDP ARRARAIVQA VTHYSDPEML VEVSCGLGEA MVGINLNDEK
301: VERFANRSE

Arabidopsis Description

PDX13RSR4 [Source:UniProtKB/TrEMBL;Acc:A0A178UIV6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.