Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G268800.1
TraesCS2B01G287600.1
TraesCS2D01G267800.1
TraesCS4A01G178700.1
TraesCS4B01G138900.1
TraesCS4D01G133600.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G60540.1 TraesCS2A01G268800.1 AT2G38230.1 16766694
AT5G60540.1 TraesCS2B01G287600.1 AT2G38230.1 16766694
AT5G60540.1 TraesCS2D01G267800.1 AT2G38230.1 16766694
AT5G60540.1 TraesCS4A01G178700.1 AT2G38230.1 16766694
AT5G60540.1 TraesCS4B01G138900.1 AT2G38230.1 16766694
AT5G60540.1 TraesCS4D01G133600.1 AT2G38230.1 16766694
AT5G60540.1 TraesCS2A01G268800.1 AT5G01410.1 16766694
AT5G60540.1 TraesCS2B01G287600.1 AT5G01410.1 16766694
AT5G60540.1 TraesCS2D01G267800.1 AT5G01410.1 16766694
AT5G60540.1 TraesCS4A01G178700.1 AT5G01410.1 16766694
AT5G60540.1 TraesCS4B01G138900.1 AT5G01410.1 16766694
AT5G60540.1 TraesCS4D01G133600.1 AT5G01410.1 16766694
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os02t0130100-01 Rice cytosol 73.31 89.41
KXG29380 Sorghum cytosol 72.67 88.63
Zm00001d053981_P002 Maize cytosol 73.31 88.03
TraesCS4D01G289800.1 Wheat plastid 80.06 87.68
TraesCS6B01G117600.1 Wheat cytosol 70.42 85.55
GSMUA_Achr7P07370_001 Banana cytosol 57.56 70.75
TraesCS4A01G013200.2 Wheat cytosol 62.7 69.39
HORVU4Hr1G075840.3 Barley mitochondrion 78.14 68.64
VIT_06s0004g03000.t01 Wine grape cytosol 55.31 68.25
KRH75883 Soybean cytosol 56.27 67.83
KRH65766 Soybean cytosol 54.98 67.32
AT5G60540.1 Thale cress cytosol 51.45 62.75
CDY31539 Canola cytosol 50.8 62.7
Bra002473.1-P Field mustard cytosol 50.8 62.7
PGSC0003DMT400020828 Potato cytosol 50.48 62.55
Solyc11g069290.1.1 Tomato plastid 50.48 62.55
CDY09196 Canola cytosol 45.66 61.47
CDX80159 Canola cytosol 39.55 60.0
KRH75832 Soybean cytosol 17.68 56.7
Protein Annotations
KEGG:00220+3.5.1.2KEGG:00250+3.5.1.2KEGG:00471+3.5.1.2KEGG:00750+4.3.3.6MapMan:7.7.1.2InterPro:Class_I_gatase-like
GO:GO:0003674GO:GO:0003824GO:GO:0004359GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016787GO:GO:0042819GO:GO:0042823InterPro:IPR002161InterPro:IPR029062
HAMAP:MF_01615PFAM:PF01174ScanProsite:PS01236PFscan:PS51130PANTHER:PTHR31559InterPro:PdxT/SNO
InterPro:PdxT/SNO_CSSUPFAM:SSF52317TIGRFAMs:TIGR03800EnsemblPlantsGene:TraesCS4B01G291200EnsemblPlants:TraesCS4B01G291200.1TIGR:cd01749
SEG:seg:::::
Description
No Description!
Coordinates
chr4B:+:576107240..576110180
Molecular Weight (calculated)
33795.7 Da
IEP (calculated)
5.908
GRAVY (calculated)
0.031
Length
311 amino acids
Sequence
(BLAST)
001: MAVVGVLALQ GSYNEHMSAL RRIGVKGVEV RKPEQLHGLD SLIIPGGEST TMAKLANYHN LFPALREFVG AGKPVWGTCA GLIFLANKAV GQKLGGQELV
101: GGLDCTVHRN FFGSQLQSFE TELSVPMLAE KEGGSNTCRG VFIRAPAILE VGSDVEILAE CPVPSGRPSI TIPSAEGVEM CVSGCSFYSS TLLTKCFEKY
201: YYMSSGYPDG SLVENILQIT LSLLCTDLQC ILPWQEEVYS KDRVIVAVRQ GNILATAFHP ELTSDCRWHR FFLDMDRESH PKAFSALSLS SSSRGSEGGS
301: KTKPFDLPIF E
Best Arabidopsis Sequence Match ( AT5G60540.1 )
(BLAST)
001: MTVGVLALQG SFNEHIAALR RLGVQGVEIR KADQLLTVSS LIIPGGESTT MAKLAEYHNL FPALREFVKM GKPVWGTCAG LIFLADRAVG QKEGGQELVG
101: GLDCTVHRNF FGSQIQSFEA DILVPQLTSQ EGGPETYRGV FIRAPAVLDV GPDVEVLADY PVPSNKVLYS SSTVQIQEED ALPETKVIVA VKQGNLLATA
201: FHPELTADTR WHSYFIKMTK EIEQGASSSS SKTIVSVGET SAGPEPAKPD LPIFQ
Arabidopsis Description
PDX2PDX2 [Source:UniProtKB/TrEMBL;Acc:A0A178UA48]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.