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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • nucleus 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G331900.1 Wheat cytosol 96.32 97.04
TraesCS5D01G337800.1 Wheat cytosol 93.38 94.31
HORVU2Hr1G092350.1 Barley cytosol 29.9 87.77
HORVU5Hr1G084160.2 Barley cytosol 89.71 87.35
Os09t0540600-01 Rice cytosol 83.09 82.68
EER97107 Sorghum cytosol 80.64 81.64
Zm00001d022614_P001 Maize cytosol 78.43 79.4
GSMUA_Achr8P33950_001 Banana nucleus 62.5 63.12
GSMUA_Achr1P26410_001 Banana nucleus 60.05 60.2
PGSC0003DMT400015787 Potato cytosol 55.39 56.08
VIT_03s0038g02430.t01 Wine grape cytosol 54.9 55.86
Solyc01g111590.2.1 Tomato cytosol 54.9 55.58
KRH29002 Soybean nucleus 53.19 53.85
KRH24317 Soybean nucleus 52.21 53.12
CDY26787 Canola cytosol 52.7 51.93
Bra037289.1-P Field mustard cytosol 52.45 51.82
CDY47479 Canola cytosol 52.45 51.69
TraesCS5B01G378700.1 Wheat nucleus 53.92 51.4
Bra001997.1-P Field mustard nucleus 51.72 50.48
AT2G16780.1 Thale cress cytosol 50.74 49.88
AT4G35050.1 Thale cress cytosol 50.49 48.58
CDY70131 Canola cytosol 23.53 45.93
TraesCS3B01G280400.1 Wheat nucleus 29.17 25.27
TraesCS4B01G131200.1 Wheat nucleus 25.74 21.78
TraesCS5B01G137200.1 Wheat cytosol, mitochondrion, nucleus, plastid 25.25 21.33
Protein Annotations
MapMan:12.2.1.3Gene3D:2.130.10.10InterPro:G-protein_beta_WD-40_repGO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:Histone-bd_RBBP4_NInterPro:IPR001680InterPro:IPR015943InterPro:IPR017986PFAM:PF00400PFAM:PF12265
PRINTS:PR00320ScanProsite:PS00678PFscan:PS50082PFscan:PS50294PANTHER:PTHR22850PANTHER:PTHR22850:SF137
SMART:SM00320SUPFAM:SSF50978EnsemblPlantsGene:TraesCS5B01G332200EnsemblPlants:TraesCS5B01G332200.1InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeat
InterPro:WD40_repeat_CSInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfSEG:seg::
Description
No Description!
Coordinates
chr5B:+:516093894..516099657
Molecular Weight (calculated)
44514.9 Da
IEP (calculated)
4.564
GRAVY (calculated)
-0.321
Length
408 amino acids
Sequence
(BLAST)
001: MDGGSGSSFQ AVAAAAAMEM EEYLNWKKNA PVLYDLVMSH PLEWPSLTVQ WLPSGSPASA RSHRLVLGTH ASDDSANHLM LVDAVLPLPP RLAAAAAAED
101: RAVPAPSVSI GRSAPHQGEV NRARCMPQRP YTVATKTCVD EVHVYHLGED GEKGGADVVL RGHGAEGYGL AWSATKEGFL LSGSYDKKIC LWDLKAGNGA
201: PVLDAQQVFE AHEDVVEDVA WHLKDENLFG SVGDDCKFMM WDLRTNKPEQ SIVAHQKEVN SLSFNPFNEW ILATASGDGT IKLFDQRKLS RSLHAFDNHE
301: GEVFQVEWNP NMETVLASHA ADKRVMIWDV SRIGEEQADE DAGDGPPELL FVHGGHTAKI SELSWNPSEK WVVASVAEDN VLQIWEMAES IYSDDNSNNA
401: NSASCLST
Best Arabidopsis Sequence Match ( AT4G35050.1 )
(BLAST)
001: MAAEEGKDEA GLDQVEEEFS IWKRNTPFLY DLMISHPLEW PSLTLHWVPS TPIPYSKDPY FAVHKLILGT HTSGGAQDFL MVADVVIPTP DAEPGLGGRD
101: QEPIVPKVEI KQKIRVDGEV NRARCMPQKP TLVGAKTSGS EVFLFDYARL SGKPQTSECD PDLRLMGHEQ EGYGLAWSSF KEGYLLSGSQ DQRICLWDVS
201: ATATDKVLNP MHVYEGHQSI IEDVAWHMKN ENIFGSAGDD CQLVIWDLRT NQMQHQVKVH EREINYLSFN PFNEWVLATA SSDSTVALFD LRKLTAPLHV
301: LSKHEGEVFQ VEWDPNHETV LASSGEDRRL MVWDINRVGD EQLEIELDAE DGPPELLFSH GGHKAKISDF AWNKDEPWVI SSVAEDNSLQ VWQMAESIYR
401: EDDEDEDDDD EGNQNAQHSN ENQK
Arabidopsis Description
MSI3At4g35050 [Source:UniProtKB/TrEMBL;Acc:Q5HZ33]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.