Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037502.1-P | Field mustard | plastid | 83.11 | 82.46 |
| VIT_12s0057g01240.t01 | Wine grape | cytosol | 68.87 | 71.9 |
| Solyc03g111850.2.1 | Tomato | plastid | 67.28 | 62.04 |
| PGSC0003DMT400039190 | Potato | plastid | 66.23 | 61.07 |
| GSMUA_Achr3P04280_001 | Banana | plastid | 64.12 | 61.06 |
| CDX86321 | Canola | plastid | 79.68 | 60.52 |
| TraesCS7A01G512300.1 | Wheat | cytosol | 52.51 | 60.49 |
| AT2G04400.1 | Thale cress | plastid | 63.32 | 59.7 |
| Zm00001d025652_P005 | Maize | mitochondrion, plastid | 64.91 | 58.99 |
| EES12321 | Sorghum | plastid | 65.44 | 58.77 |
| CDX85318 | Canola | plastid | 80.47 | 58.65 |
| HORVU2Hr1G081460.2 | Barley | plastid | 62.27 | 57.42 |
| GSMUA_Achr3P12080_001 | Banana | plastid | 59.37 | 57.4 |
| TraesCS2B01G348500.1 | Wheat | plastid | 61.74 | 57.21 |
| HORVU7Hr1G114660.3 | Barley | mitochondrion | 53.03 | 56.94 |
| TraesCS2A01G335200.1 | Wheat | plastid | 62.01 | 56.9 |
| TraesCS2D01G329500.1 | Wheat | plastid | 61.74 | 56.8 |
| TraesCS5A01G169500.1 | Wheat | plastid | 54.62 | 54.91 |
| HORVU5Hr1G052150.3 | Barley | plastid | 54.35 | 54.64 |
| TraesCS5D01G173900.1 | Wheat | plastid | 54.35 | 54.64 |
| TraesCS5B01G166300.1 | Wheat | plastid | 54.35 | 54.64 |
| TraesCS7B01G423900.1 | Wheat | plastid | 54.09 | 54.23 |
| EES05044 | Sorghum | plastid | 54.35 | 54.21 |
| EES14765 | Sorghum | plastid | 53.83 | 53.4 |
| TraesCS7D01G501700.1 | Wheat | plastid | 49.87 | 52.65 |
| Zm00001d024393_P001 | Maize | plastid | 53.03 | 52.48 |
| Os09t0255400-02 | Rice | plastid | 52.51 | 51.69 |
| Zm00001d020008_P001 | Maize | plastid | 51.98 | 50.64 |
| OQU89210 | Sorghum | plastid | 51.72 | 48.64 |
| TraesCS3D01G285000.1 | Wheat | cytosol | 26.39 | 41.15 |
| Os08t0320400-01 | Rice | plastid | 24.27 | 39.83 |
Protein Annotations
| KEGG:00400+4.1.1.48 | Gene3D:3.20.20.70 | MapMan:4.1.5.3.4 | EntrezGene:834875 | UniProt:A0A178U9E1 | ProteinID:AED95635.1 |
| ProteinID:AED95636.1 | ProteinID:ANM68260.1 | ArrayExpress:AT5G48220 | EnsemblPlantsGene:AT5G48220 | RefSeq:AT5G48220 | TAIR:AT5G48220 |
| RefSeq:AT5G48220-TAIR-G | EnsemblPlants:AT5G48220.1 | TAIR:AT5G48220.1 | EMBL:AY050327 | EMBL:AY052223 | EMBL:AY060498 |
| InterPro:Aldolase_TIM | Unigene:At.49143 | ProteinID:BAA97002.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004425 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006568 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009534 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009579 |
| GO:GO:0009987 | InterPro:IPR013785 | InterPro:Indole-3-GlycerolPSynthase_CS | InterPro:Indole-3-glycerol_P_synth | HAMAP:MF_00134_B | RefSeq:NP_001078734.1 |
| RefSeq:NP_001318761.1 | RefSeq:NP_199633.1 | ProteinID:OAO90245.1 | PFAM:PF00218 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00614 | PANTHER:PTHR22854 |
| PANTHER:PTHR22854:SF10 | UniProt:Q9LUB2 | InterPro:RibuloseP-bd_barrel | SUPFAM:SSF51366 | UniParc:UPI0000048C27 | SEG:seg |
Description
AT5g48220/MIF21_11 [Source:UniProtKB/TrEMBL;Acc:Q9LUB2]
Coordinates
chr5:+:19549798..19552267
Molecular Weight (calculated)
41970.7 Da
IEP (calculated)
5.822
GRAVY (calculated)
-0.228
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAALLSLQP FPSSATQRRL SPFNLHNTLT RPSSYAPLRA QKSGITEGSD SALEAKVSEQ EVGMYQNEVV ESQGIRIRRR PPTGPPLHYV GPFEFRLQNE
101: GNTPRNILEE IVWHKDKEVA QMKERKPLYS LKKALDNVPP AKDFIGALRS AHQRTGLPGL IAEVKKASPS RGILREDFNP VEIAQAYEKG GAACLSVLTD
201: DKYFKGSYEN LQAIMEAGVK CPLLLKEFIV EAWQIYYGRS KGADAVLLIA SVLPDLDIKY MIKICKILGM ATLVEVHDER EMDRVLAIEG VELIGINNRN
301: LETFEVDLGI TKKLLEGERG ELIRQKDILV VGESGLFTPE DIAFVQEAGV KAVLVGESLI KQSDPGKAIS TLFGRDVSE
101: GNTPRNILEE IVWHKDKEVA QMKERKPLYS LKKALDNVPP AKDFIGALRS AHQRTGLPGL IAEVKKASPS RGILREDFNP VEIAQAYEKG GAACLSVLTD
201: DKYFKGSYEN LQAIMEAGVK CPLLLKEFIV EAWQIYYGRS KGADAVLLIA SVLPDLDIKY MIKICKILGM ATLVEVHDER EMDRVLAIEG VELIGINNRN
301: LETFEVDLGI TKKLLEGERG ELIRQKDILV VGESGLFTPE DIAFVQEAGV KAVLVGESLI KQSDPGKAIS TLFGRDVSE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.