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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G166300.1 Wheat plastid 98.67 98.67
TraesCS5A01G169500.1 Wheat plastid 98.67 98.67
HORVU5Hr1G052150.3 Barley plastid 97.61 97.61
Os09t0255400-02 Rice plastid 78.25 76.62
Zm00001d020008_P001 Maize plastid 70.56 68.38
OQU89210 Sorghum plastid 71.35 66.75
TraesCS7D01G501700.1 Wheat plastid 62.6 65.74
GSMUA_Achr3P12080_001 Banana plastid 63.66 61.22
VIT_12s0057g01240.t01 Wine grape cytosol 56.5 58.68
KRH14867 Soybean nucleus, plastid 57.82 55.61
KRH73214 Soybean nucleus, plastid 57.82 55.47
Bra037502.1-P Field mustard plastid 55.17 54.45
AT5G48220.1 Thale cress plastid 54.64 54.35
Solyc03g111850.2.1 Tomato plastid 57.56 52.8
PGSC0003DMT400039190 Potato plastid 57.29 52.55
TraesCS2D01G329500.1 Wheat plastid 56.76 51.94
AT2G04400.1 Thale cress plastid 53.32 50.0
Bra013209.1-P Field mustard plastid 52.25 49.01
CDY15081 Canola plastid 51.99 48.88
CDY66247 Canola plastid 51.99 48.76
CDY00860 Canola cytosol 11.41 45.26
CDX86321 Canola plastid 54.64 41.28
CDX85318 Canola plastid 54.11 39.23
CDY43301 Canola plastid 28.91 37.46
TraesCS3D01G285000.1 Wheat cytosol 23.87 37.04
CDX94822 Canola plastid 15.12 32.76
CDY17450 Canola plastid 28.65 29.19
Protein Annotations
KEGG:00400+4.1.1.48Gene3D:3.20.20.70MapMan:4.1.5.3.4InterPro:Aldolase_TIMGO:GO:0003674GO:GO:0003824
GO:GO:0004425GO:GO:0006568GO:GO:0008150GO:GO:0008152GO:GO:0009987InterPro:IPR013785
InterPro:Indole-3-GlycerolPSynthase_CSInterPro:Indole-3-glycerol_P_synthHAMAP:MF_00134_BPFAM:PF00218ScanProsite:PS00614PANTHER:PTHR22854
PANTHER:PTHR22854:SF14InterPro:RibuloseP-bd_barrelSUPFAM:SSF51366EnsemblPlantsGene:TraesCS5D01G173900EnsemblPlants:TraesCS5D01G173900.1TIGR:cd00331
SEG:seg:::::
Description
No Description!
Coordinates
chr5D:+:272354667..272357968
Molecular Weight (calculated)
41352.8 Da
IEP (calculated)
6.720
GRAVY (calculated)
-0.124
Length
377 amino acids
Sequence
(BLAST)
001: MESLLAAAPF HVAAFSSVSS PSTHSPSLLR SIRGGGRAVR CAAAKEAILY ALEHDEMFNS EEVIQWESGK TINSIAAAQG IRIRRRCRPR YPSEGSGDDK
101: AVPRNILEQI VWDKEVEVSQ RKAKKPLKSV VESSEHAPPA RDFIGALTAA HRRNGVPALI AEVKKASPSR GVLRENFNPV EIAQAYEKNG AACLSILTDE
201: KHFQGSFENL ETVRNSGVQC PLLCKEFVID IWQIYYARSK GADAILLIAA VLPDLDMKYM LRICKNLGMT ALIEVHDEKE LDRVLRIDGV ELIGINNRSL
301: ETFVVDTSNT RMLMEKRGDI IKEKGIFVVG ESGLFTPDDV AYVHSAGVSA VLVGESLIKE EDPGRAIAGL FGKELLS
Best Arabidopsis Sequence Match ( AT5G48220.2 )
(BLAST)
001: MYQNEVVESQ GIRIRRRPPT GPPLHYVGPF EFRLQNEGNT PRNILEEIVW HKDKEVAQMK ERKPLYSLKK ALDNVPPAKD FIGALRSAHQ RTGLPGLIAE
101: VKKASPSRGI LREDFNPVEI AQAYEKGGAA CLSVLTDDKY FKGSYENLQA IMEAGVKCPL LLKEFIVEAW QIYYGRSKGA DAVLLIASVL PDLDIKYMIK
201: ICKILGMATL VEVHDEREMD RVLAIEGVEL IGINNRNLET FEVDLGITKK LLEGERGELI RQKDILVVGE SGLFTPEDIA FVQEAGVKAV LVGESLIKQS
301: DPGKAISTLF GRDVSE
Arabidopsis Description
AT5g48220/MIF21_11 [Source:UniProtKB/TrEMBL;Acc:Q9LUB2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.