Factsheet for Bra037502.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G48220.1	Thale cress	plastid	82.46	83.11
VIT_12s0057g01240.t01	Wine grape	cytosol	69.11	72.73
CDX86321	Canola	plastid	92.15	70.54
CDX85318	Canola	plastid	88.22	64.81
GSMUA_Achr3P04280_001	Banana	plastid	65.97	63.32
Solyc03g111850.2.1	Tomato	plastid	67.02	62.29
PGSC0003DMT400039190	Potato	plastid	66.49	61.8
TraesCS7A01G512300.1	Wheat	cytosol	52.62	61.09
Zm00001d025652_P005	Maize	mitochondrion, plastid	65.18	59.71
Bra013209.1-P	Field mustard	plastid	62.83	59.7
HORVU7Hr1G114660.3	Barley	mitochondrion	54.19	58.64
EES12321	Sorghum	plastid	64.4	58.29
GSMUA_Achr3P12080_001	Banana	plastid	59.42	57.91
TraesCS2B01G348500.1	Wheat	plastid	61.52	57.46
HORVU2Hr1G081460.2	Barley	plastid	61.78	57.42
TraesCS2D01G329500.1	Wheat	plastid	61.78	57.28
TraesCS2A01G335200.1	Wheat	plastid	61.26	56.66
HORVU5Hr1G052150.3	Barley	plastid	54.71	55.44
TraesCS5B01G166300.1	Wheat	plastid	54.71	55.44
TraesCS5A01G169500.1	Wheat	plastid	54.71	55.44
TraesCS5D01G173900.1	Wheat	plastid	54.45	55.17
TraesCS7B01G423900.1	Wheat	plastid	53.66	54.23
EES05044	Sorghum	plastid	53.93	54.21
TraesCS7D01G501700.1	Wheat	plastid	49.74	52.92
EES14765	Sorghum	plastid	52.88	52.88
Zm00001d024393_P001	Maize	plastid	52.62	52.48
Os09t0255400-02	Rice	plastid	52.09	51.69
Zm00001d020008_P001	Maize	plastid	51.57	50.64
OQU89210	Sorghum	plastid	52.88	50.12
TraesCS3D01G285000.1	Wheat	cytosol	26.18	41.15
Os08t0320400-01	Rice	plastid	23.82	39.39

Protein Annotations

KEGG:00400+4.1.1.48	Gene3D:3.20.20.70	MapMan:4.1.5.3.4	InterPro:Aldolase_TIM	EnsemblPlantsGene:Bra037502	EnsemblPlants:Bra037502.1
EnsemblPlants:Bra037502.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0004425	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006568	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507
GO:GO:0009534	GO:GO:0009536	GO:GO:0009570	GO:GO:0009579	GO:GO:0009987	InterPro:IPR013785
InterPro:Indole-3-GlycerolPSynthase_CS	InterPro:Indole-3-glycerol_P_synth	UniProt:M4F8U0	HAMAP:MF_00134_B	PFAM:PF00218	ScanProsite:PS00614
PANTHER:PTHR22854	PANTHER:PTHR22854:SF10	InterPro:RibuloseP-bd_barrel	SUPFAM:SSF51366	UniParc:UPI000253F8C1	:

Description

AT5G48220 (E=1e-183) | indole-3-glycerol phosphate synthase, putative

Coordinates

chrA06:+:21158006..21159987

Molecular Weight (calculated)

42074.9 Da

IEP (calculated)

6.389

GRAVY (calculated)

-0.136

Length

382 amino acids

Sequence
(BLAST)

001: MEGLVSFQPF PSSVIQRRLS TVYLHRLTRS SSSSCAPLRA QQSGITGGSE SVSSALEGKA SEQEVVIYQD EVVASQGIRI RRRPLTGPPL HYVGPFEFRL
101: QNEGNTPRNI LEEIVWHKDK EVAQMKEKRP LYTLKKALET VPPPRDFIGA LRSAHQRTGL PGLIAEVKKA SPSRGILRED FDPVAIAQAY EKGGAACLSV
201: LTDEKYFKGS FENLQAIREA GVKCPLLCKE FIIEAWQIYY GRSKGADAIL LIASVLPDLD IKYMIKICKI LGMATLVEVH DEREMDRVLA IDGVELIGIN
301: NRNLETFEVD IGITKRLLEG ERGELIRQKD ILVVGESGLF SPEDIAFVQE AGVKAVLVGE SLVKQSDPGQ GISALFGRDV SG

Best Arabidopsis Sequence Match ( AT5G48220.1 )
(BLAST)

001: MEAALLSLQP FPSSATQRRL SPFNLHNTLT RPSSYAPLRA QKSGITEGSD SALEAKVSEQ EVGMYQNEVV ESQGIRIRRR PPTGPPLHYV GPFEFRLQNE
101: GNTPRNILEE IVWHKDKEVA QMKERKPLYS LKKALDNVPP AKDFIGALRS AHQRTGLPGL IAEVKKASPS RGILREDFNP VEIAQAYEKG GAACLSVLTD
201: DKYFKGSYEN LQAIMEAGVK CPLLLKEFIV EAWQIYYGRS KGADAVLLIA SVLPDLDIKY MIKICKILGM ATLVEVHDER EMDRVLAIEG VELIGINNRN
301: LETFEVDLGI TKKLLEGERG ELIRQKDILV VGESGLFTPE DIAFVQEAGV KAVLVGESLI KQSDPGKAIS TLFGRDVSE

Arabidopsis Description

AT5g48220/MIF21_11 [Source:UniProtKB/TrEMBL;Acc:Q9LUB2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.