Factsheet for Bra000342.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83439	Canola	cytosol	92.02	94.62
AT2G44130.1	Thale cress	cytosol	67.83	66.5
Bra004807.1-P	Field mustard	cytosol	65.09	60.84
Bra007494.1-P	Field mustard	nucleus	56.36	53.81
TraesCS4B01G087600.1	Wheat	cytosol	32.67	35.6
VIT_05s0094g01590.t01	Wine grape	cytosol	32.17	35.34
TraesCS4A01G228600.1	Wheat	cytosol	32.42	35.33
Zm00001d049016_P001	Maize	cytosol	32.67	35.22
EES09544	Sorghum	cytosol	33.17	34.73
Zm00001d007274_P001	Maize	cytosol	32.17	34.58
TraesCS4B01G087800.1	Wheat	cytosol	31.67	34.32
HORVU4Hr1G014970.1	Barley	cytosol	31.42	34.15
TraesCS4D01G084900.1	Wheat	cytosol	31.42	34.05
TraesCS4A01G228800.1	Wheat	cytosol	31.42	34.05
EES08254	Sorghum	cytosol	32.42	34.03
Os11t0246200-00	Rice	cytosol	31.42	32.9
Zm00001d050815_P001	Maize	nucleus	30.42	32.71
TraesCS4D01G085000.1	Wheat	plastid	32.17	31.7
OQU85159	Sorghum	cytosol	30.17	31.51
PGSC0003DMT400060940	Potato	cytosol	26.68	31.2
Solyc10g080610.1.1	Tomato	cytosol	26.68	31.1
GSMUA_Achr6P06940_001	Banana	cytosol	28.43	30.81
Os02t0563000-00	Rice	cytosol	28.93	29.67
KRH58914	Soybean	extracellular, plasma membrane	28.18	29.35
Bra026753.1-P	Field mustard	cytosol	25.94	29.05
Bra026116.1-P	Field mustard	cytosol	25.69	28.77
Bra035183.1-P	Field mustard	cytosol	25.69	28.69
GSMUA_Achr6P28790_001	Banana	cytosol	9.23	22.42

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:2.120.10.80	MapMan:9.2.1.1.2	EnsemblPlantsGene:Bra000342	EnsemblPlants:Bra000342.1	EnsemblPlants:Bra000342.1-P
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M4C814	PFAM:PF00646	PFAM:PF01344
PANTHER:PTHR24414	PANTHER:PTHR24414:SF34	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383
UniParc:UPI000253FDBE	SEG:seg	:	:	:	:

Description

AT2G44130 (E=1e-156) | kelch repeat-containing F-box family protein

Coordinates

chrA03:+:10644903..10646108

Molecular Weight (calculated)

44434.3 Da

IEP (calculated)

6.742

GRAVY (calculated)

-0.483

Length

401 amino acids

Sequence
(BLAST)

001: MDKSSNRAEE VSKDLIPGLP PELAMECLVR VPYQFQSAMR SVCRSWRSLL SDSSFIRERR RCGKAELLLC LVQPFSPPNT ASKAVGDTET PLGVEEKGEK
101: RASSTPRFGL SVYNATMATW NRVAFPQQQI PLFCECVAVQ DAGKILLIGG WDPETLQPVK DVYVLEGSGR RWRRGAPMKE SRSFFACASV GPTKVYVAGG
201: HDEQKNALRS AEVYDVEKDE WSTIPSMAEG RDECQGFSMG TGLGGFCVLS GYATESQGRF RQDGEVYDPM TKSWSRIENV WPFPDTSPRG RTITAGDTRG
301: SSRLRCFSTD RELQSNSQWE SRDGWRKWKL DVEVIQLPAS GSSVYVGSSG GESVIMIGGR RESEGAMMKT TEEKNAGNWS HVNDISFGFS TLPFSHASIY
401: V

Best Arabidopsis Sequence Match ( AT2G44130.1 )
(BLAST)

001: MTMEVSKKKG GDFQQCHELI PGLPSELALE CLVRVPFQFQ SAMRSVCRSW RSLLSDSSFI QERRRCGKTE LLLCLVQPLT PPIPASKSVD ETLMVDEKKS
101: EDESHPRVFC TPRFGLSVYN AAMSTWHRVA FPEEEQIPLF CECVVLQDAG KILLIGGWDP ETLQPTRDVY VLEFAGRKWR RGAPMKESRS FFACASVSPT
201: KVYVAGGHDD QKNALRSAEV YDVEKDEWSS VTPMTEGRDE CQGFAVGMGL RFCVLSGYGT ESQGRFRSDG EIYDPATDSW SRIDNVWRFP DTSPRGRTAG
301: DFRSSSTLWC FTDTDLQSER RWETNDDSRN LKLDLQSIQL PMTGSSVFAG SLGGESVVMI GGKRESEGEG EGGVMMKMTT EKKMGKWSHH VHIPCDFSTL
401: PFSHASIYV

Arabidopsis Description

F-box/kelch-repeat protein At2g44130 [Source:UniProtKB/Swiss-Prot;Acc:O80582]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.