Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83439 | Canola | cytosol | 65.77 | 68.97 |
| Bra000342.1-P | Field mustard | cytosol | 66.5 | 67.83 |
| CDX95589 | Canola | cytosol | 63.33 | 66.41 |
| CDY17882 | Canola | cytosol, mitochondrion, nucleus | 59.9 | 63.97 |
| CDX79780 | Canola | cytosol | 60.39 | 59.09 |
| Bra004807.1-P | Field mustard | cytosol | 60.64 | 57.81 |
| AT3G59940.1 | Thale cress | cytosol | 55.5 | 54.31 |
| Zm00001d007274_P001 | Maize | cytosol | 32.27 | 35.39 |
| VIT_05s0094g01590.t01 | Wine grape | cytosol | 31.05 | 34.79 |
| TraesCS4A01G228600.1 | Wheat | cytosol | 31.3 | 34.78 |
| Zm00001d049016_P001 | Maize | cytosol | 31.3 | 34.41 |
| TraesCS4B01G087600.1 | Wheat | cytosol | 30.81 | 34.24 |
| EES09544 | Sorghum | cytosol | 31.78 | 33.94 |
| EES08254 | Sorghum | cytosol | 31.05 | 33.25 |
| PGSC0003DMT400060940 | Potato | cytosol | 27.63 | 32.94 |
| Solyc10g080610.1.1 | Tomato | cytosol | 27.63 | 32.85 |
| TraesCS4A01G228800.1 | Wheat | cytosol | 29.58 | 32.7 |
| TraesCS4B01G087800.1 | Wheat | cytosol | 29.58 | 32.7 |
| HORVU4Hr1G014970.1 | Barley | cytosol | 29.34 | 32.52 |
| TraesCS4D01G084900.1 | Wheat | cytosol | 29.34 | 32.43 |
| Os11t0246200-00 | Rice | cytosol | 30.32 | 32.38 |
| KRH58914 | Soybean | extracellular, plasma membrane | 30.32 | 32.21 |
| GSMUA_Achr6P06940_001 | Banana | cytosol | 28.85 | 31.89 |
| TraesCS4D01G085000.1 | Wheat | plastid | 31.3 | 31.45 |
| Zm00001d050815_P001 | Maize | nucleus | 28.36 | 31.1 |
| OQU85159 | Sorghum | cytosol | 29.1 | 30.99 |
| AT1G15670.1 | Thale cress | cytosol | 26.41 | 30.08 |
| AT1G80440.1 | Thale cress | cytosol | 25.67 | 29.66 |
| Os02t0563000-00 | Rice | cytosol | 26.65 | 27.88 |
| GSMUA_Achr6P28790_001 | Banana | cytosol | 9.54 | 23.64 |
Protein Annotations
| Gene3D:2.120.10.80 | EntrezGene:819019 | MapMan:9.2.1.1.2 | UniProt:A0A178VUS0 | ProteinID:AAC23417.2 | ProteinID:AEC10382.1 |
| ArrayExpress:AT2G44130 | EnsemblPlantsGene:AT2G44130 | RefSeq:AT2G44130 | TAIR:AT2G44130 | RefSeq:AT2G44130-TAIR-G | EnsemblPlants:AT2G44130.1 |
| TAIR:AT2G44130.1 | EMBL:AY074864 | EMBL:AY088471 | EMBL:AY124843 | Unigene:At.48588 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0019748 | GO:GO:2000762 | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 |
| RefSeq:NP_566009.1 | UniProt:O80582 | ProteinID:OAP08612.1 | PFAM:PF00646 | PFAM:PF01344 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR24414 |
| PANTHER:PTHR24414:SF34 | SMART:SM00256 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI00000A09AF |
| SEG:seg | : | : | : | : | : |
Description
F-box/kelch-repeat protein At2g44130 [Source:UniProtKB/Swiss-Prot;Acc:O80582]
Coordinates
chr2:+:18253610..18255054
Molecular Weight (calculated)
45889.4 Da
IEP (calculated)
5.519
GRAVY (calculated)
-0.425
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MTMEVSKKKG GDFQQCHELI PGLPSELALE CLVRVPFQFQ SAMRSVCRSW RSLLSDSSFI QERRRCGKTE LLLCLVQPLT PPIPASKSVD ETLMVDEKKS
101: EDESHPRVFC TPRFGLSVYN AAMSTWHRVA FPEEEQIPLF CECVVLQDAG KILLIGGWDP ETLQPTRDVY VLEFAGRKWR RGAPMKESRS FFACASVSPT
201: KVYVAGGHDD QKNALRSAEV YDVEKDEWSS VTPMTEGRDE CQGFAVGMGL RFCVLSGYGT ESQGRFRSDG EIYDPATDSW SRIDNVWRFP DTSPRGRTAG
301: DFRSSSTLWC FTDTDLQSER RWETNDDSRN LKLDLQSIQL PMTGSSVFAG SLGGESVVMI GGKRESEGEG EGGVMMKMTT EKKMGKWSHH VHIPCDFSTL
401: PFSHASIYV
101: EDESHPRVFC TPRFGLSVYN AAMSTWHRVA FPEEEQIPLF CECVVLQDAG KILLIGGWDP ETLQPTRDVY VLEFAGRKWR RGAPMKESRS FFACASVSPT
201: KVYVAGGHDD QKNALRSAEV YDVEKDEWSS VTPMTEGRDE CQGFAVGMGL RFCVLSGYGT ESQGRFRSDG EIYDPATDSW SRIDNVWRFP DTSPRGRTAG
301: DFRSSSTLWC FTDTDLQSER RWETNDDSRN LKLDLQSIQL PMTGSSVFAG SLGGESVVMI GGKRESEGEG EGGVMMKMTT EKKMGKWSHH VHIPCDFSTL
401: PFSHASIYV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.