CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
EER93773
EES05455
EES07174
EES07175
EES07176
EES07177
EES12521
OQU81984

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G59940.1	EER93773	AT2G37040.1	21798944
AT3G59940.1	EES05455	AT2G37040.1	21798944
AT3G59940.1	EES07174	AT2G37040.1	21798944
AT3G59940.1	EES07175	AT2G37040.1	21798944
AT3G59940.1	EES07176	AT2G37040.1	21798944
AT3G59940.1	EES07177	AT2G37040.1	21798944
AT3G59940.1	EES12521	AT2G37040.1	21798944
AT3G59940.1	OQU81984	AT2G37040.1	21798944
AT3G59940.1	EER93773	AT3G53260.1	21798944
AT3G59940.1	EES05455	AT3G53260.1	21798944
AT3G59940.1	EES07174	AT3G53260.1	21798944
AT3G59940.1	EES07175	AT3G53260.1	21798944
AT3G59940.1	EES07176	AT3G53260.1	21798944
AT3G59940.1	EES07177	AT3G53260.1	21798944
AT3G59940.1	EES12521	AT3G53260.1	21798944
AT3G59940.1	OQU81984	AT3G53260.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES09544	Sorghum	cytosol	97.91	97.65
Zm00001d049016_P001	Maize	cytosol	85.6	87.9
Zm00001d007274_P001	Maize	cytosol	82.98	84.99
Os11t0246200-00	Rice	cytosol	82.98	82.77
TraesCS4A01G228600.1	Wheat	cytosol	78.27	81.25
TraesCS4B01G087600.1	Wheat	cytosol	78.01	80.98
TraesCS4A01G228800.1	Wheat	cytosol	78.01	80.54
HORVU4Hr1G014970.1	Barley	cytosol	77.75	80.49
TraesCS4B01G087800.1	Wheat	cytosol	77.75	80.27
TraesCS4D01G084900.1	Wheat	cytosol	77.49	80.0
TraesCS4D01G085000.1	Wheat	plastid	78.53	73.71
OQU85159	Sorghum	cytosol	42.15	41.93
GSMUA_Achr6P06940_001	Banana	cytosol	37.7	38.92
GSMUA_Achr6P28790_001	Banana	cytosol	16.75	38.79
EER88591	Sorghum	cytosol	34.55	34.29
EES06499	Sorghum	cytosol	32.98	33.78
PGSC0003DMT400060940	Potato	cytosol	30.1	33.53
Solyc10g080610.1.1	Tomato	cytosol	29.84	33.14
KRH58914	Soybean	extracellular, plasma membrane	33.25	32.99
CDX83439	Canola	cytosol	33.25	32.56
Bra000342.1-P	Field mustard	cytosol	34.03	32.42
CDX95589	Canola	cytosol	32.46	31.79
CDY41196	Canola	nucleus	32.72	31.25
AT2G44130.1	Thale cress	cytosol	33.25	31.05
CDX71859	Canola	cytosol	32.2	30.6
CDY17882	Canola	cytosol, mitochondrion, nucleus	30.37	30.29
Bra007494.1-P	Field mustard	nucleus	32.98	30.0
CDX79780	Canola	cytosol	32.72	29.9
AT3G59940.1	Thale cress	cytosol	31.94	29.19
Bra004807.1-P	Field mustard	cytosol	32.72	29.14
VIT_05s0094g01590.t01	Wine grape	cytosol	27.49	28.77

Protein Annotations

Gene3D:1.20.1280.50	Gene3D:2.120.10.80	EntrezGene:8076911	MapMan:9.2.1.1.2	UniProt:C5Y7S5	EnsemblPlants:EES08254
ProteinID:EES08254	ProteinID:EES08254.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	PFAM:PF00646
PFAM:PF01344	PANTHER:PTHR24414	PANTHER:PTHR24414:SF34	SMART:SM00612	EnsemblPlantsGene:SORBI_3005G085600	SUPFAM:SSF117281
SUPFAM:SSF81383	unigene:Sbi.17780	UniParc:UPI0001A8661B	RefSeq:XP_002449266.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:11789845..11792416

Molecular Weight (calculated)

40981.3 Da

IEP (calculated)

8.215

GRAVY (calculated)

-0.325

Length

382 amino acids

Sequence
(BLAST)

001: MRSPRGVGSG CYRGAGGQDQ HVDLIPGIPD DVAVDCLARV PHASHRAMRR VCRGWRSAAS TPAFASARAQ ADANEDIVYL MQFGNPSAAA DDAEPKGDDG
101: PANTPAYGVA VYNVTTGEWR RDRGAPPVVP VFAQCAAVGT RLAVLGGWDP RTFEPVADVH VLDAATGRWR RGAPMRSARS FFACAEAGGK IYVAGGHDKH
201: KNALKTAEAY DPRADAWDPL PDMSEERDEC DGMATVAGDR FLAVSGYRTA RQGGFERDAE WFDPAARAWR RLERVRAPPS AAHVVVKGRV WCIEGNAVME
301: WMGTRRGWRE VGPYPPGLKA GTARAVCVGG GEKVVVTGAL DGEEGGGRHA VWVFDVKSKS WTVVRPPPEF AGFVFSVAAV RI

Best Arabidopsis Sequence Match ( AT2G44130.1 )
(BLAST)

001: MTMEVSKKKG GDFQQCHELI PGLPSELALE CLVRVPFQFQ SAMRSVCRSW RSLLSDSSFI QERRRCGKTE LLLCLVQPLT PPIPASKSVD ETLMVDEKKS
101: EDESHPRVFC TPRFGLSVYN AAMSTWHRVA FPEEEQIPLF CECVVLQDAG KILLIGGWDP ETLQPTRDVY VLEFAGRKWR RGAPMKESRS FFACASVSPT
201: KVYVAGGHDD QKNALRSAEV YDVEKDEWSS VTPMTEGRDE CQGFAVGMGL RFCVLSGYGT ESQGRFRSDG EIYDPATDSW SRIDNVWRFP DTSPRGRTAG
301: DFRSSSTLWC FTDTDLQSER RWETNDDSRN LKLDLQSIQL PMTGSSVFAG SLGGESVVMI GGKRESEGEG EGGVMMKMTT EKKMGKWSHH VHIPCDFSTL
401: PFSHASIYV

Arabidopsis Description

F-box/kelch-repeat protein At2g44130 [Source:UniProtKB/Swiss-Prot;Acc:O80582]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.