Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d049016_P001 | Maize | cytosol | 89.81 | 90.05 |
| EES09544 | Sorghum | cytosol | 85.52 | 83.29 |
| EES08254 | Sorghum | cytosol | 84.99 | 82.98 |
| TraesCS4A01G228600.1 | Wheat | cytosol | 78.55 | 79.62 |
| TraesCS4B01G087600.1 | Wheat | cytosol | 78.02 | 79.08 |
| Os11t0246200-00 | Rice | cytosol | 80.7 | 78.59 |
| HORVU4Hr1G014970.1 | Barley | cytosol | 77.21 | 78.05 |
| TraesCS4A01G228800.1 | Wheat | cytosol | 77.21 | 77.84 |
| TraesCS4D01G084900.1 | Wheat | cytosol | 76.68 | 77.3 |
| TraesCS4B01G087800.1 | Wheat | cytosol | 76.68 | 77.3 |
| TraesCS4D01G085000.1 | Wheat | plastid | 78.55 | 71.99 |
| Zm00001d050815_P001 | Maize | nucleus | 43.43 | 43.43 |
| GSMUA_Achr6P28790_001 | Banana | cytosol | 17.69 | 40.0 |
| GSMUA_Achr6P06940_001 | Banana | cytosol | 39.14 | 39.46 |
| Zm00001d036925_P001 | Maize | cytosol | 36.46 | 35.51 |
| PGSC0003DMT400060940 | Potato | cytosol | 31.9 | 34.69 |
| Solyc10g080610.1.1 | Tomato | cytosol | 31.1 | 33.72 |
| CDX83439 | Canola | cytosol | 34.05 | 32.56 |
| CDX95589 | Canola | cytosol | 34.05 | 32.56 |
| AT2G44130.1 | Thale cress | cytosol | 35.39 | 32.27 |
| Bra000342.1-P | Field mustard | cytosol | 34.58 | 32.17 |
| KRH58914 | Soybean | extracellular, plasma membrane | 32.98 | 31.95 |
| CDY17882 | Canola | cytosol, mitochondrion, nucleus | 32.44 | 31.59 |
| CDX79780 | Canola | cytosol | 35.39 | 31.58 |
| CDY41196 | Canola | nucleus | 33.51 | 31.25 |
| Bra004807.1-P | Field mustard | cytosol | 35.92 | 31.24 |
| CDX71859 | Canola | cytosol | 33.51 | 31.09 |
| Bra007494.1-P | Field mustard | nucleus | 34.58 | 30.71 |
| AT3G59940.1 | Thale cress | cytosol | 32.98 | 29.43 |
| VIT_05s0094g01590.t01 | Wine grape | cytosol | 28.42 | 29.04 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:103647976 | Gene3D:2.120.10.80 | MapMan:9.2.1.1.2 | UniProt:A0A1D6F561 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | InterPro:IPR001810 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | ProteinID:ONM26432.1 | PFAM:PF00646 | PFAM:PF01344 |
| PANTHER:PTHR24414 | PANTHER:PTHR24414:SF34 | SMART:SM00612 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI000220ABE9 |
| EnsemblPlantsGene:Zm00001d007274 | EnsemblPlants:Zm00001d007274_P001 | EnsemblPlants:Zm00001d007274_T001 | SEG:seg | : | : |
Description
Protein kinase Kelch repeat:Kelch
Coordinates
chr2:-:226465984..226467105
Molecular Weight (calculated)
39819.0 Da
IEP (calculated)
8.399
GRAVY (calculated)
-0.285
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAPRGGGGC RGGQEHVELI PGIPDDVAVD CLARVPHASH RAMRRVCRGW RSAAAAPAFA SARAAAGANE DLVYLMQFGN PSGDDGPKDG DDGPGSTPAY
101: GVAVYNVTTG EWRRERGAPP VVPVFAQCAA VGTRVAVLGG WDPRTFEPVA DVHVLDAATG RWRRAAPMRS ARSFFACAEA GGKIYVAGGH DKHKNALKTA
201: EAYDAGADAW DPLPDMSEER DECDGMATVA GDRFLAVSGY RTARQGGFER DAEWFDPAAR AWRRLDRVRA PPSAAHVVVR GRVWCIEGNA VMEWMGTRRG
301: WREVGPYPPG LKAGTARAVC VGGGEKVVVT GALDGEGGRH ALWVFDVKTK SWTVVRPPPE FAGFVFSVAS VRI
101: GVAVYNVTTG EWRRERGAPP VVPVFAQCAA VGTRVAVLGG WDPRTFEPVA DVHVLDAATG RWRRAAPMRS ARSFFACAEA GGKIYVAGGH DKHKNALKTA
201: EAYDAGADAW DPLPDMSEER DECDGMATVA GDRFLAVSGY RTARQGGFER DAEWFDPAAR AWRRLDRVRA PPSAAHVVVR GRVWCIEGNA VMEWMGTRRG
301: WREVGPYPPG LKAGTARAVC VGGGEKVVVT GALDGEGGRH ALWVFDVKTK SWTVVRPPPE FAGFVFSVAS VRI
001: MTMEVSKKKG GDFQQCHELI PGLPSELALE CLVRVPFQFQ SAMRSVCRSW RSLLSDSSFI QERRRCGKTE LLLCLVQPLT PPIPASKSVD ETLMVDEKKS
101: EDESHPRVFC TPRFGLSVYN AAMSTWHRVA FPEEEQIPLF CECVVLQDAG KILLIGGWDP ETLQPTRDVY VLEFAGRKWR RGAPMKESRS FFACASVSPT
201: KVYVAGGHDD QKNALRSAEV YDVEKDEWSS VTPMTEGRDE CQGFAVGMGL RFCVLSGYGT ESQGRFRSDG EIYDPATDSW SRIDNVWRFP DTSPRGRTAG
301: DFRSSSTLWC FTDTDLQSER RWETNDDSRN LKLDLQSIQL PMTGSSVFAG SLGGESVVMI GGKRESEGEG EGGVMMKMTT EKKMGKWSHH VHIPCDFSTL
401: PFSHASIYV
101: EDESHPRVFC TPRFGLSVYN AAMSTWHRVA FPEEEQIPLF CECVVLQDAG KILLIGGWDP ETLQPTRDVY VLEFAGRKWR RGAPMKESRS FFACASVSPT
201: KVYVAGGHDD QKNALRSAEV YDVEKDEWSS VTPMTEGRDE CQGFAVGMGL RFCVLSGYGT ESQGRFRSDG EIYDPATDSW SRIDNVWRFP DTSPRGRTAG
301: DFRSSSTLWC FTDTDLQSER RWETNDDSRN LKLDLQSIQL PMTGSSVFAG SLGGESVVMI GGKRESEGEG EGGVMMKMTT EKKMGKWSHH VHIPCDFSTL
401: PFSHASIYV
Arabidopsis Description
F-box/kelch-repeat protein At2g44130 [Source:UniProtKB/Swiss-Prot;Acc:O80582]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.