Factsheet for Bra004807.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79780	Canola	cytosol	91.38	93.78
Bra000342.1-P	Field mustard	cytosol	60.84	65.09
AT2G44130.1	Thale cress	cytosol	57.81	60.64
Bra007494.1-P	Field mustard	nucleus	55.71	56.9
VIT_05s0094g01590.t01	Wine grape	cytosol	31.93	37.53
Zm00001d007274_P001	Maize	cytosol	31.24	35.92
TraesCS4B01G087600.1	Wheat	cytosol	30.3	35.33
TraesCS4A01G228600.1	Wheat	cytosol	30.3	35.33
Zm00001d049016_P001	Maize	cytosol	30.3	34.95
TraesCS4B01G087800.1	Wheat	cytosol	29.6	34.32
TraesCS4A01G228800.1	Wheat	cytosol	29.6	34.32
HORVU4Hr1G014970.1	Barley	cytosol	29.37	34.15
TraesCS4D01G084900.1	Wheat	cytosol	29.37	34.05
Solyc10g080610.1.1	Tomato	cytosol	27.04	33.72
EES09544	Sorghum	cytosol	30.07	33.68
PGSC0003DMT400060940	Potato	cytosol	26.57	33.24
EES08254	Sorghum	cytosol	29.14	32.72
Os11t0246200-00	Rice	cytosol	28.9	32.38
TraesCS4D01G085000.1	Wheat	plastid	30.3	31.94
GSMUA_Achr6P06940_001	Banana	cytosol	27.51	31.89
KRH58914	Soybean	extracellular, plasma membrane	28.21	31.43
Zm00001d050815_P001	Maize	nucleus	26.81	30.83
OQU85159	Sorghum	cytosol	26.57	29.69
Bra035183.1-P	Field mustard	cytosol	23.54	28.13
Bra026116.1-P	Field mustard	cytosol	23.31	27.93
Os02t0563000-00	Rice	cytosol	25.17	27.62
Bra026753.1-P	Field mustard	cytosol	22.38	26.82
GSMUA_Achr6P28790_001	Banana	cytosol	10.26	26.67

Protein Annotations

Gene3D:2.120.10.80	MapMan:9.2.1.1.2	EnsemblPlantsGene:Bra004807	EnsemblPlants:Bra004807.1	EnsemblPlants:Bra004807.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M4CKS2	PFAM:PF01344	PANTHER:PTHR24414	PANTHER:PTHR24414:SF34
SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0002547C52	SEG:seg

Description

AT2G44130 (E=1e-095) | kelch repeat-containing F-box family protein

Coordinates

chrA05:+:1908181..1909470

Molecular Weight (calculated)

47353.1 Da

IEP (calculated)

6.131

GRAVY (calculated)

-0.409

Length

429 amino acids

Sequence
(BLAST)

001: MSKKRAGDVS KGIHKCHGLI PGLPSELAIE CLVRVPYQFQ SDMKSVSRSW RSLLSDSSFT KERQRCGKAE LLLCLVQPLT PPNPASKAVG ETLLGEKEVE
101: DESPRVSGTP RFGLSVYNAT MSTWNRVAFP GQQIPLFCEC VAVQASGKIL LIGGWDPETL QPVKDVYVLE LAGEGSGRRW RKGASMNEAR SFFACATVGS
201: TKVYVAGGHD DQKNALRSAE VYDVEKDEWL MLPPMTEGRD ECQGLAMGLQ KAHLNFDKDG PLSAHLCDGY TVGKELRFCV LSGYGTESQG RFRSDGEVYD
301: PVTNSWSRIE NVWPFFDTSP RGRIIDGDIR GSSSKLWCFS DCKREWETED ESRKWRLDLE SIELPVTGSS VYGGSLGGEA VVMSGGGSES GGRGTMMMRK
401: TEEKWSRVHD HEIPFGFSSL PFSHASIYV

Best Arabidopsis Sequence Match ( AT2G44130.1 )
(BLAST)

001: MTMEVSKKKG GDFQQCHELI PGLPSELALE CLVRVPFQFQ SAMRSVCRSW RSLLSDSSFI QERRRCGKTE LLLCLVQPLT PPIPASKSVD ETLMVDEKKS
101: EDESHPRVFC TPRFGLSVYN AAMSTWHRVA FPEEEQIPLF CECVVLQDAG KILLIGGWDP ETLQPTRDVY VLEFAGRKWR RGAPMKESRS FFACASVSPT
201: KVYVAGGHDD QKNALRSAEV YDVEKDEWSS VTPMTEGRDE CQGFAVGMGL RFCVLSGYGT ESQGRFRSDG EIYDPATDSW SRIDNVWRFP DTSPRGRTAG
301: DFRSSSTLWC FTDTDLQSER RWETNDDSRN LKLDLQSIQL PMTGSSVFAG SLGGESVVMI GGKRESEGEG EGGVMMKMTT EKKMGKWSHH VHIPCDFSTL
401: PFSHASIYV

Arabidopsis Description

F-box/kelch-repeat protein At2g44130 [Source:UniProtKB/Swiss-Prot;Acc:O80582]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.