Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d050815_P001 | Maize | nucleus | 60.87 | 63.81 |
OQU85159 | Sorghum | cytosol | 60.61 | 61.72 |
Os11t0246200-00 | Rice | cytosol | 39.9 | 40.73 |
GSMUA_Achr6P28790_001 | Banana | cytosol | 15.6 | 36.97 |
GSMUA_Achr6P06940_001 | Banana | cytosol | 34.78 | 36.76 |
Os02t0208700-00 | Rice | cytosol | 28.39 | 36.16 |
Os06t0594400-02 | Rice | cytosol | 33.5 | 34.38 |
PGSC0003DMT400060940 | Potato | cytosol | 29.67 | 33.82 |
Solyc10g080610.1.1 | Tomato | cytosol | 28.64 | 32.56 |
CDX83439 | Canola | cytosol | 30.43 | 30.51 |
CDX95589 | Canola | cytosol | 28.9 | 28.97 |
Bra000342.1-P | Field mustard | cytosol | 29.67 | 28.93 |
KRH58914 | Soybean | extracellular, plasma membrane | 28.13 | 28.57 |
CDY41196 | Canola | nucleus | 28.13 | 27.5 |
CDY17882 | Canola | cytosol, mitochondrion, nucleus | 26.34 | 26.89 |
CDX71859 | Canola | cytosol | 27.62 | 26.87 |
Bra007494.1-P | Field mustard | nucleus | 28.64 | 26.67 |
AT2G44130.1 | Thale cress | cytosol | 27.88 | 26.65 |
AT3G59940.1 | Thale cress | cytosol | 27.88 | 26.08 |
CDX79780 | Canola | cytosol | 27.88 | 26.08 |
Bra004807.1-P | Field mustard | cytosol | 27.62 | 25.17 |
VIT_05s0094g01590.t01 | Wine grape | cytosol | 22.51 | 24.11 |
Protein Annotations
Gene3D:1.20.1280.50 | EntrezGene:107277071 | Gene3D:2.120.10.80 | MapMan:9.2.1.1.2 | UniProt:A0A0N7KFI1 | ProteinID:BAS79281.1 |
InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
GO:GO:0009987 | GO:GO:0019005 | GO:GO:0019538 | GO:GO:0030162 | GO:GO:0031625 | GO:GO:0043161 |
InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | EnsemblPlantsGene:Os02g0563000 | EnsemblPlants:Os02t0563000-00 |
PFAM:PF00646 | PFAM:PF01344 | PANTHER:PTHR24413 | PANTHER:PTHR24413:SF153 | SMART:SM00256 | SMART:SM00612 |
SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0001C7D8D8 | RefSeq:XP_015624832.1 | SEG:seg | : |
Description
KISS ME DEADLY3, KISS ME DEADLY 3, F-box protein 96Hypothetical conserved gene. (Os02t0563000-00)
Coordinates
chr2:+:21365479..21366789
Molecular Weight (calculated)
40368.3 Da
IEP (calculated)
5.187
GRAVY (calculated)
-0.162
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGAIERDGA LLGAALVEPE AAELIPGLPD DVAMECLARV PSRSHRAVRR VCRGWRRAAA SEAFRRRRRA AGAAEDVVFL VQATPARGGD DGKGPSAATE
101: CALAAANLTT GEWRRVEGAG EGEEEAWGGG VPFFARCAAA GDGRHVAVVG GWEPAALCLT RDVRVLDVPA GVWRRGAAMP DSRGFFGCTG SGGVVYVAGG
201: HDESKNALRS AYAYDVASDA WRALPDMSEE RDEPQLVANP GRVLAASGYP TDAQGAFKKT AERYTTTTTG DATAWSSEGD MAPNTAETCL AAVGGKVWAV
301: GAGKGGVREW DGGAWRDVAD GPPGMKACVK AVGAGDGDGA AMFVFVFGKV EDGKQYAAWV MEDAGGAARW RGVAVPPGFG GFVYSGAAVR V
101: CALAAANLTT GEWRRVEGAG EGEEEAWGGG VPFFARCAAA GDGRHVAVVG GWEPAALCLT RDVRVLDVPA GVWRRGAAMP DSRGFFGCTG SGGVVYVAGG
201: HDESKNALRS AYAYDVASDA WRALPDMSEE RDEPQLVANP GRVLAASGYP TDAQGAFKKT AERYTTTTTG DATAWSSEGD MAPNTAETCL AAVGGKVWAV
301: GAGKGGVREW DGGAWRDVAD GPPGMKACVK AVGAGDGDGA AMFVFVFGKV EDGKQYAAWV MEDAGGAARW RGVAVPPGFG GFVYSGAAVR V
001: MGVSKKKSGE IRGDLIPGLP EELAIECLVR VPFQFHSSIK SVCRSWKCVI SSRSFIKERI GFGKAESLLC LVQPLTSPPS PAMMEGGEMS QKKKEEEEGE
101: SQMTQQLLQP RITGTPLYGL SVYNATLDTW HRVAIPERIP LFCECVAIQD AGKVLLIGGW DPETLQPVRD VFVLDFFAGE GSGRRFRRGR PMSAARSFFA
201: CASVGSTKVY VAGGHDDQKN ALRSAEVYDV EKDEWSMLPP MTEGRDECHG FSMATDPGFC VLSGYGTETQ GQFRSDGEIY DPITNSWSTI ENVWPFPDLS
301: PRGRTAAAAA EFPGDFRGCR LWCFIDSERQ SQPHWEVEDD SMKWKVIMDT IRLPVTTMTS VFAGSLSGQA VAMIGGGGEE SGTMMVKTTA EKNGGKWSHV
401: NTPSGFSSLP FSCSSIYV
101: SQMTQQLLQP RITGTPLYGL SVYNATLDTW HRVAIPERIP LFCECVAIQD AGKVLLIGGW DPETLQPVRD VFVLDFFAGE GSGRRFRRGR PMSAARSFFA
201: CASVGSTKVY VAGGHDDQKN ALRSAEVYDV EKDEWSMLPP MTEGRDECHG FSMATDPGFC VLSGYGTETQ GQFRSDGEIY DPITNSWSTI ENVWPFPDLS
301: PRGRTAAAAA EFPGDFRGCR LWCFIDSERQ SQPHWEVEDD SMKWKVIMDT IRLPVTTMTS VFAGSLSGQA VAMIGGGGEE SGTMMVKTTA EKNGGKWSHV
401: NTPSGFSSLP FSCSSIYV
Arabidopsis Description
SKIP20F-box/kelch-repeat protein SKIP20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Y1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.