Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d050815_P001 Maize nucleus 60.87 63.81
OQU85159 Sorghum cytosol 60.61 61.72
Os11t0246200-00 Rice cytosol 39.9 40.73
GSMUA_Achr6P28790_001 Banana cytosol 15.6 36.97
GSMUA_Achr6P06940_001 Banana cytosol 34.78 36.76
Os02t0208700-00 Rice cytosol 28.39 36.16
Os06t0594400-02 Rice cytosol 33.5 34.38
PGSC0003DMT400060940 Potato cytosol 29.67 33.82
Solyc10g080610.1.1 Tomato cytosol 28.64 32.56
CDX83439 Canola cytosol 30.43 30.51
CDX95589 Canola cytosol 28.9 28.97
Bra000342.1-P Field mustard cytosol 29.67 28.93
KRH58914 Soybean extracellular, plasma membrane 28.13 28.57
CDY41196 Canola nucleus 28.13 27.5
CDY17882 Canola cytosol, mitochondrion, nucleus 26.34 26.89
CDX71859 Canola cytosol 27.62 26.87
Bra007494.1-P Field mustard nucleus 28.64 26.67
AT2G44130.1 Thale cress cytosol 27.88 26.65
AT3G59940.1 Thale cress cytosol 27.88 26.08
CDX79780 Canola cytosol 27.88 26.08
Bra004807.1-P Field mustard cytosol 27.62 25.17
VIT_05s0094g01590.t01 Wine grape cytosol 22.51 24.11
Protein Annotations
Gene3D:1.20.1280.50EntrezGene:107277071Gene3D:2.120.10.80MapMan:9.2.1.1.2UniProt:A0A0N7KFI1ProteinID:BAS79281.1
InterPro:F-box-like_dom_sfInterPro:F-box_domGO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0019005GO:GO:0019538GO:GO:0030162GO:GO:0031625GO:GO:0043161
InterPro:IPR001810InterPro:IPR015915InterPro:Kelch-typ_b-propellerInterPro:Kelch_1EnsemblPlantsGene:Os02g0563000EnsemblPlants:Os02t0563000-00
PFAM:PF00646PFAM:PF01344PANTHER:PTHR24413PANTHER:PTHR24413:SF153SMART:SM00256SMART:SM00612
SUPFAM:SSF117281SUPFAM:SSF81383UniParc:UPI0001C7D8D8RefSeq:XP_015624832.1SEG:seg:
Description
KISS ME DEADLY3, KISS ME DEADLY 3, F-box protein 96Hypothetical conserved gene. (Os02t0563000-00)
Coordinates
chr2:+:21365479..21366789
Molecular Weight (calculated)
40368.3 Da
IEP (calculated)
5.187
GRAVY (calculated)
-0.162
Length
391 amino acids
Sequence
(BLAST)
001: MGGAIERDGA LLGAALVEPE AAELIPGLPD DVAMECLARV PSRSHRAVRR VCRGWRRAAA SEAFRRRRRA AGAAEDVVFL VQATPARGGD DGKGPSAATE
101: CALAAANLTT GEWRRVEGAG EGEEEAWGGG VPFFARCAAA GDGRHVAVVG GWEPAALCLT RDVRVLDVPA GVWRRGAAMP DSRGFFGCTG SGGVVYVAGG
201: HDESKNALRS AYAYDVASDA WRALPDMSEE RDEPQLVANP GRVLAASGYP TDAQGAFKKT AERYTTTTTG DATAWSSEGD MAPNTAETCL AAVGGKVWAV
301: GAGKGGVREW DGGAWRDVAD GPPGMKACVK AVGAGDGDGA AMFVFVFGKV EDGKQYAAWV MEDAGGAARW RGVAVPPGFG GFVYSGAAVR V
Best Arabidopsis Sequence Match ( AT3G59940.1 )
(BLAST)
001: MGVSKKKSGE IRGDLIPGLP EELAIECLVR VPFQFHSSIK SVCRSWKCVI SSRSFIKERI GFGKAESLLC LVQPLTSPPS PAMMEGGEMS QKKKEEEEGE
101: SQMTQQLLQP RITGTPLYGL SVYNATLDTW HRVAIPERIP LFCECVAIQD AGKVLLIGGW DPETLQPVRD VFVLDFFAGE GSGRRFRRGR PMSAARSFFA
201: CASVGSTKVY VAGGHDDQKN ALRSAEVYDV EKDEWSMLPP MTEGRDECHG FSMATDPGFC VLSGYGTETQ GQFRSDGEIY DPITNSWSTI ENVWPFPDLS
301: PRGRTAAAAA EFPGDFRGCR LWCFIDSERQ SQPHWEVEDD SMKWKVIMDT IRLPVTTMTS VFAGSLSGQA VAMIGGGGEE SGTMMVKTTA EKNGGKWSHV
401: NTPSGFSSLP FSCSSIYV
Arabidopsis Description
SKIP20F-box/kelch-repeat protein SKIP20 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1Y1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.