Factsheet for Bra035183.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87309	Canola	cytosol	99.16	99.16
AT1G80440.1	Thale cress	cytosol	81.34	82.49
Bra026116.1-P	Field mustard	cytosol	64.62	64.8
Bra026753.1-P	Field mustard	cytosol	63.51	63.69
VIT_09s0002g08870.t01	Wine grape	cytosol	17.27	54.39
GSMUA_AchrUn_...	Banana	mitochondrion	10.86	52.7
Solyc03g120320.1.1	Tomato	cytosol	49.58	50.14
KRH47516	Soybean	cytosol	49.03	49.72
PGSC0003DMT400006584	Potato	cytosol	49.03	49.58
VIT_09s0002g05080.t01	Wine grape	cytosol	48.19	48.73
KRH23494	Soybean	cytosol	47.63	47.77
VIT_09s0002g05010.t01	Wine grape	cytosol, peroxisome, plastid	40.11	47.21
PGSC0003DMT400042651	Potato	cytosol	47.35	46.96
KRH44388	Soybean	cytosol	45.96	46.74
PGSC0003DMT400042652	Potato	cytosol	46.8	46.41
Solyc06g066770.1.1	Tomato	cytosol	46.8	45.78
Solyc03g120330.1.1	Tomato	cytosol	45.13	44.88
PGSC0003DMT400006583	Potato	cytosol	44.85	44.72
VIT_09s0002g08860.t01	Wine grape	cytosol	43.18	44.54
PGSC0003DMT400042650	Potato	cytosol	46.52	44.18
VIT_09s0002g04930.t01	Wine grape	cytosol	18.38	42.86
KRH09825	Soybean	cytosol	43.73	40.99
VIT_09s0002g08880.t01	Wine grape	cytosol	35.1	40.91
Os02t0208700-00	Rice	cytosol	32.87	38.44
Zm00001d036925_P001	Maize	cytosol	39.55	37.08
TraesCS6B01G206300.1	Wheat	cytosol	38.16	36.83
TraesCS6A01G178900.1	Wheat	cytosol	38.16	36.83
EER88591	Sorghum	cytosol	39.28	36.62
VIT_09s0002g05210.t01	Wine grape	cytosol	13.65	36.57
Os06t0594400-02	Rice	cytosol	38.72	36.48
TraesCS6D01G165600.1	Wheat	cytosol	35.93	36.34
EES06499	Sorghum	cytosol	36.21	34.85
TraesCS7D01G352400.1	Wheat	cytosol	37.33	34.81
TraesCS7B01G257400.1	Wheat	cytosol	36.77	34.29
Bra000342.1-P	Field mustard	cytosol	28.69	25.69
Bra004807.1-P	Field mustard	cytosol	28.13	23.54
Bra007494.1-P	Field mustard	nucleus	26.74	22.86

Protein Annotations

Gene3D:2.120.10.80	MapMan:9.2.1.1.2	EnsemblPlantsGene:Bra035183	EnsemblPlants:Bra035183.1	EnsemblPlants:Bra035183.1-P	InterPro:F-box-like_dom_sf
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009719	GO:GO:0009987	GO:GO:0019005	GO:GO:0019748	GO:GO:0080037	GO:GO:2000762
InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M4F286	PFAM:PF01344	PFAM:PF13964
PANTHER:PTHR24413	PANTHER:PTHR24413:SF93	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0002541E3F

Description

AT1G80440 (E=1e-171) | kelch repeat-containing F-box family protein

Coordinates

chrA07:-:22479803..22480882

Molecular Weight (calculated)

39315.5 Da

IEP (calculated)

4.988

GRAVY (calculated)

-0.120

Length

359 amino acids

Sequence
(BLAST)

001: MELIPNLPYD VARECLLRSS YKQFPVMASV CRGWNREVSL SEFFQQRKAS GHSQELLIMS QARVDTDREP GSGKNSASPE YRVAVLESGS GLWTELPPIP
101: GQSNGLPLFC KLVSIGSDLI VLGGLDPVTW QASDSVFVFS FLNSKWRAGA VMPGVKRSFF GCASDSDRTV LVAGGHDEEK QALTSAIVYD LAEDKWTFFP
201: DMSRERDECK AIFHAGKFHV IGGYATEEQG QFSKSAESFD VSTWQWGPVK EEFLDGGETV SAPIYATTGE NGDLYACWRG DVMVLRNDTW LKVGQIPADV
301: YSVAYVAVRP GKLTVIGNGK ALAGYGGATV GYICDLSSFR WVKLETHVGH VQAGCFLEV

Best Arabidopsis Sequence Match ( AT1G80440.1 )
(BLAST)

001: MELIPNLPDD VARECLLRSS YQQFPVIASV CRAWNREVSL SQFLHQRKAS RHSQELLILS QARVDPAGSG KIIATPEYRI SVLESGSGLW TELPPIPGQT
101: KGLPLFCRLV SVGSDLIVLG GLDPITWQAH DSVFVFSFLT SKWRVGATMP GVRRSFFGCA SDSDRTVLVA GGHNEEKCAL TSAMVYDVSE DKWTFLPDMA
201: RERDECKAVF HAGRFHVIGG YATEEQGQFS KTAESFDVST WEWGPLTEDF LDDTGDTVSP PTCVAGGDLY ACWGGDVMMF LNDKWQKVGQ IPADVYNVTY
301: VAVRPGMLIV IGNGKALAGY GEATVGYICD LSSSRWVKLE THGGHVQAGC FLEV

Arabidopsis Description

F-box/kelch-repeat protein At1g80440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.