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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra035183.1-P Field mustard cytosol 99.16 99.16
CDY39979 Canola cytosol 94.99 94.99
AT1G80440.1 Thale cress cytosol 80.78 81.92
CDY36579 Canola cytosol 63.79 63.97
CDY58028 Canola cytosol 62.95 63.13
CDY53309 Canola cytosol 62.67 62.85
CDY69686 Canola cytosol 61.84 62.18
VIT_09s0002g08870.t01 Wine grape cytosol 17.55 55.26
GSMUA_AchrUn_... Banana mitochondrion 10.59 51.35
Solyc03g120320.1.1 Tomato cytosol 48.75 49.3
KRH47516 Soybean cytosol 48.47 49.15
PGSC0003DMT400006584 Potato cytosol 48.19 48.73
VIT_09s0002g05080.t01 Wine grape cytosol 47.63 48.17
KRH23494 Soybean cytosol 47.08 47.21
PGSC0003DMT400042651 Potato cytosol 47.35 46.96
PGSC0003DMT400042652 Potato cytosol 47.08 46.69
VIT_09s0002g05010.t01 Wine grape cytosol, peroxisome, plastid 39.55 46.56
KRH44388 Soybean cytosol 45.4 46.18
Solyc06g066770.1.1 Tomato cytosol 46.8 45.78
Solyc03g120330.1.1 Tomato cytosol 45.13 44.88
PGSC0003DMT400006583 Potato cytosol 44.85 44.72
VIT_09s0002g08860.t01 Wine grape cytosol 43.18 44.54
PGSC0003DMT400042650 Potato cytosol 46.52 44.18
VIT_09s0002g04930.t01 Wine grape cytosol 18.38 42.86
VIT_09s0002g08880.t01 Wine grape cytosol 34.82 40.58
KRH09825 Soybean cytosol 43.18 40.47
Os02t0208700-00 Rice cytosol 32.59 38.11
EER88591 Sorghum cytosol 39.28 36.62
VIT_09s0002g05210.t01 Wine grape cytosol 13.65 36.57
Zm00001d036925_P001 Maize cytosol 39.0 36.55
TraesCS6A01G178900.1 Wheat cytosol 37.6 36.29
TraesCS6B01G206300.1 Wheat cytosol 37.6 36.29
Os06t0594400-02 Rice cytosol 38.16 35.96
TraesCS6D01G165600.1 Wheat cytosol 35.38 35.77
EES06499 Sorghum cytosol 35.93 34.58
TraesCS7D01G352400.1 Wheat cytosol 36.77 34.29
TraesCS7B01G257400.1 Wheat cytosol 36.21 33.77
CDX83439 Canola cytosol 28.69 26.41
CDX95589 Canola cytosol 27.86 25.64
CDY41196 Canola nucleus 27.3 24.5
CDY17882 Canola cytosol, mitochondrion, nucleus 25.91 24.28
CDX79780 Canola cytosol 28.13 24.16
CDX71859 Canola cytosol 27.02 24.13
Protein Annotations
EnsemblPlants:CDX87309EnsemblPlantsGene:GSBRNA2T00146274001Gene3D:2.120.10.80GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:F-box-like_dom_sfInterPro:IPR015915InterPro:Kelch-typ_b-propellerInterPro:Kelch_1PANTHER:PTHR24413PANTHER:PTHR24413:SF93
PFAM:PF01344PFAM:PF13964ProteinID:CDX87309ProteinID:CDX87309.1SMART:SM00612SUPFAM:SSF117281
SUPFAM:SSF81383UniParc:UPI0004EE22F1MapMan:9.2.1.1.2:::
Description
BnaA07g35640D
Coordinates
chrLK031850:+:116716..118071
Molecular Weight (calculated)
39327.6 Da
IEP (calculated)
4.984
GRAVY (calculated)
-0.107
Length
359 amino acids
Sequence
(BLAST)
001: MELIPNLPYD VARECLLRSS YKQFPVMASV CRGWNREVSL SEFFQQRKAS GHSQELLIMS QARVDTDREP GSGKNSASPE YRVAVLESGS GLWTELPPIL
101: GQPNGLPLFC KLVSIGSDLI VLGGLDPVTW QASDSVFVFS FLNSKWRAGA VMPGVKRSFF GCASDSDRTV LVAGGHDDEK QALTSAIVYD LAEDKWTFFP
201: DMSRERDECK AIFHAGKFHV IGGYATEEQG QFSKSAESFD VSTWQWGPVK EEFLDGGETV SAPIYATTGE NGDLYACWRG DVMVLRNDTW LKVGQIPADV
301: YSVAYVAVRP GKLTVIGNGK ALAGYGGATV GYICDLSSFR WVKLETHVGH VQAGCFLEV
Best Arabidopsis Sequence Match ( AT1G80440.1 )
(BLAST)
001: MELIPNLPDD VARECLLRSS YQQFPVIASV CRAWNREVSL SQFLHQRKAS RHSQELLILS QARVDPAGSG KIIATPEYRI SVLESGSGLW TELPPIPGQT
101: KGLPLFCRLV SVGSDLIVLG GLDPITWQAH DSVFVFSFLT SKWRVGATMP GVRRSFFGCA SDSDRTVLVA GGHNEEKCAL TSAMVYDVSE DKWTFLPDMA
201: RERDECKAVF HAGRFHVIGG YATEEQGQFS KTAESFDVST WEWGPLTEDF LDDTGDTVSP PTCVAGGDLY ACWGGDVMMF LNDKWQKVGQ IPADVYNVTY
301: VAVRPGMLIV IGNGKALAGY GEATVGYICD LSSSRWVKLE THGGHVQAGC FLEV
Arabidopsis Description
F-box/kelch-repeat protein At1g80440 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8L2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.