Factsheet for Bra011851.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011852.1-P	Field mustard	cytosol	53.01	61.62
AT1G61540.1	Thale cress	cytosol	47.95	49.5
Bra011855.1-P	Field mustard	plastid	28.43	47.39
Bra011856.1-P	Field mustard	nucleus	20.24	43.98
Bra001343.1-P	Field mustard	nucleus	26.27	40.98
Bra011853.1-P	Field mustard	cytosol	39.76	40.15
Bra011854.1-P	Field mustard	plastid	37.59	40.1
Bra032688.1-P	Field mustard	cytosol	33.49	39.38
Bra033628.1-P	Field mustard	nucleus	36.87	39.13
Bra036150.1-P	Field mustard	plastid	33.98	38.01
Bra023735.1-P	Field mustard	nucleus	33.98	37.7
Bra030332.1-P	Field mustard	cytosol	35.18	37.34
Bra040886.1-P	Field mustard	cytosol	33.49	35.73
Bra040994.1-P	Field mustard	cytosol	7.71	35.56
Bra022509.1-P	Field mustard	cytosol	28.67	35.1
Bra000083.1-P	Field mustard	extracellular	28.43	33.52
Bra018362.1-P	Field mustard	cytosol	30.36	33.42
Bra017635.1-P	Field mustard	plasma membrane	29.88	33.07
Bra011300.1-P	Field mustard	cytosol	30.36	32.98
Bra029716.1-P	Field mustard	mitochondrion	27.95	32.86
Bra006063.1-P	Field mustard	cytosol	14.22	31.89
Bra029718.1-P	Field mustard	nucleus	30.36	31.74
Bra033852.1-P	Field mustard	cytosol, plasma membrane, plastid	20.96	31.64
Bra017634.1-P	Field mustard	extracellular	14.46	28.3
Bra002939.1-P	Field mustard	cytosol	12.29	26.7

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EnsemblPlantsGene:Bra011851	EnsemblPlants:Bra011851.1	EnsemblPlants:Bra011851.1-P	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	UniProt:M4D5U4	PFAM:PF00646	PFAM:PF01344	PFscan:PS50181
PANTHER:PTHR24414	PANTHER:PTHR24414:SF23	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383
UniParc:UPI0002546055	SEG:seg	:	:	:	:

Description

AT1G61540 (E=1e-103) | kelch repeat-containing F-box family protein

Coordinates

chrA01:-:232733..233980

Molecular Weight (calculated)

47602.7 Da

IEP (calculated)

8.095

GRAVY (calculated)

-0.380

Length

415 amino acids

Sequence
(BLAST)

001: MSSKPKSRSS AATSGKDPPR DKKMKKSSLA TEPTSISILS LPDDLLINCL ARVSRLYYHF LSRVSKRFRS IIASPELYAT RSRLNRTEKC IYLYLRFPFD
101: PKTYWLTLSG LPSRNVANGS SGYYMEQIPC PNYLRPAQSS TLVSVGSDIY KIGGANHLHE CKIWKRNYCV SVSVLDCRTH TWRQAPSMGM ARNANATATL
201: FDGKIYVAGG CDEEYVSKPN WIEAFDLETQ TWVPVTNPRI FRLYEEDRVK GFEAKSVSLE GKLYIFGDEA AVYNPEEGKW SELGREMYGM FRVERGCHCV
301: IDDVLFLWDR YKRVFKWYDS KSYLWKDLIG VEGLPELSPD PQVCQVEMVD LGGKIGFLWD QYLYTATNQE CRVWCAEIAL ERRDGDEMWG KVEWFDSVLR
401: THQSCSSFHV VSASV

Best Arabidopsis Sequence Match ( AT1G61540.1 )
(BLAST)

001: MNGEKPLRER KKKMPYPSPV TEEPISIMSL PYDLLLNCFS LVSRLYYPTL SLVSKTFRSI ITSRELYEIR SRLNRTDKCL YLCFPYDMNT HWFTLCREPN
101: RNVAENSSGY LLVQVPSPNG LLPVHSSSVI AVGSNIYKIG GTKSYRHKLW KRTRYSSSVS VLDCRSHRWR QAPGMRVARG CSSTVCEVDG KIYIAGGCKE
201: DIGSLYWIEV FDPKTQTWGT LKNPCIEYQH DIGYRCEVKS LGLDGKIYMF GSEFVVYNFE EDRWKCIGRD KYNLYHAVDP MSRINSSSCV VDNVLFILDK
301: GTRVFKWYDF KVSLWKELNG VEGLPDLSDR GYVKMVDLGG KIAVLWQECL TNKKIKRIWC AEISLERRDR DEIWGKVEWF DIVLSVHSSF SLLCADTISV
401: VV

Arabidopsis Description

Putative F-box/kelch-repeat protein At1g61540 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.