Factsheet for Bra000083.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
mitochondrion 3
extracellular 3
nucleus 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07711	Canola	extracellular	97.44	97.44
CDY62432	Canola	golgi	88.35	71.17
Bra029716.1-P	Field mustard	mitochondrion	62.5	62.32
Bra029718.1-P	Field mustard	nucleus	63.07	55.92
AT5G51250.1	Thale cress	cytosol	47.16	45.11
AT3G08810.1	Thale cress	nucleus	43.18	44.31
Bra001343.1-P	Field mustard	nucleus	32.39	42.86
Bra023735.1-P	Field mustard	nucleus	42.33	39.84
AT2G03460.1	Thale cress	plastid	28.98	39.69
Bra036150.1-P	Field mustard	plastid	41.76	39.62
Bra011856.1-P	Field mustard	nucleus	21.31	39.27
Bra040994.1-P	Field mustard	cytosol	9.94	38.89
Bra006063.1-P	Field mustard	cytosol	19.89	37.84
AT3G06570.1	Thale cress	cytosol, plastid	41.48	37.44
Bra033628.1-P	Field mustard	nucleus	38.64	34.78
Bra011854.1-P	Field mustard	plastid	38.07	34.45
Bra032688.1-P	Field mustard	cytosol	33.52	33.43
Bra022509.1-P	Field mustard	cytosol	31.25	32.45
Bra017635.1-P	Field mustard	plasma membrane	32.39	30.4
Bra018362.1-P	Field mustard	cytosol	32.39	30.24
Bra030332.1-P	Field mustard	cytosol	33.24	29.92
Bra011852.1-P	Field mustard	cytosol	30.11	29.69
Bra040886.1-P	Field mustard	cytosol	32.39	29.31
Bra011855.1-P	Field mustard	plastid	20.17	28.51
Bra011851.1-P	Field mustard	cytosol, plastid	33.52	28.43
Bra011853.1-P	Field mustard	cytosol	32.67	27.98
Bra011300.1-P	Field mustard	cytosol	29.26	26.96
Bra033852.1-P	Field mustard	cytosol, plasma membrane, plastid	21.02	26.91
Bra002939.1-P	Field mustard	cytosol	14.49	26.7
Bra017634.1-P	Field mustard	extracellular	15.06	25.0

Protein Annotations

EnsemblPlants:Bra000083.1	EnsemblPlants:Bra000083.1-P	EnsemblPlantsGene:Bra000083	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PANTHER:PTHR24414	PANTHER:PTHR24414:SF23	SUPFAM:SSF117281
UniParc:UPI000254010A	UniProt:M4C7A5	MapMan:35.1	:	:	:

Description

AT5G51250 (E=1e-068) | kelch repeat-containing F-box family protein

Coordinates

chrA03:-:9194095..9195153

Molecular Weight (calculated)

39492.7 Da

IEP (calculated)

9.278

GRAVY (calculated)

0.004

Length

352 amino acids

Sequence
(BLAST)

001: MIVARVPILY YRTLSLVSKS FRSMVVSPEL YKVRSVLGLT ESCLYVCLRF GLGSYKWYTL SSKSKSSGGY VLASVPMPGD DSPRVAGLGF GYSDLVAVGS
101: DIYNIGQADK TTPTSSVSIL DCKSHMWRKA PSMPMELGSL SAIVLDRNIF VLGRRYHQYA SWKSLLQVFN TNTQTWDIPC CVLDQASHLF NFNGNLHAVN
201: IFGWVFAFNS KQGKWDQLVE IDPSVGEIKY SESYCEIDNV LYSVSKEGAL RWYDTDKTRW RDLKGLVGLP KLPRRFSGYG SYVKLTAYGG GKMLVFWSRK
301: SNILVSHMET IYCAVIALKK DKGDCWGKLE WYDGVLSVLS GTELVKIFSV TL

Best Arabidopsis Sequence Match ( AT3G08810.1 )
(BLAST)

001: MSYPERKRKR SRWSKPHSTQ NPSPSLPDDV LLSIFARVSR LYYPTLSHVS ESFRSLLASP ELYKARSLSG NTEICLYVCL RCSTGYRWFS LSRKPDQTLT
101: YEERKSSGYA LARVPIPGGS PNVRSSSLVA VGSDIYNICG SINKASSSSS VSILDCQSHT WREAPSLPVE LSSISASVRD GNQGGHGYSD SRKNSFKVFA
201: YNSKEGRWDH LVGLGAGSFM LPDSYCVIDN VSYSVSDGMF RWYDTEVRRW KDLRGLFQLP KFSAGACVIL ADYGGKMAVL WDQLPYHHGF HKTIQCAVIA
301: LERRTSFVFR EKSCQIWGKV EWVDDLLTVP TSYDLVKVLV ATL

Arabidopsis Description

F-box/kelch-repeat protein At3g08810 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9X9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.