Factsheet for Bra033852.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35547	Canola	cytosol	80.36	87.7
Bra011856.1-P	Field mustard	nucleus	25.45	36.65
Bra040886.1-P	Field mustard	cytosol	42.55	30.08
Bra033628.1-P	Field mustard	nucleus	40.73	28.64
Bra001343.1-P	Field mustard	nucleus	27.27	28.2
Bra032688.1-P	Field mustard	cytosol	36.0	28.05
Bra011300.1-P	Field mustard	cytosol	37.82	27.23
Bra017635.1-P	Field mustard	plasma membrane	35.27	25.87
Bra011854.1-P	Field mustard	plastid	34.91	24.68
Bra036150.1-P	Field mustard	plastid	33.09	24.53
Bra017634.1-P	Field mustard	extracellular	18.18	23.58
Bra011853.1-P	Field mustard	cytosol	34.55	23.11
Bra022509.1-P	Field mustard	cytosol	28.36	23.01
Bra023735.1-P	Field mustard	nucleus	31.27	22.99
Bra018362.1-P	Field mustard	cytosol	31.27	22.81
Bra030332.1-P	Field mustard	cytosol	32.36	22.76
Bra011852.1-P	Field mustard	cytosol	28.73	22.13
Bra029718.1-P	Field mustard	nucleus	30.55	21.16
Bra000083.1-P	Field mustard	extracellular	26.91	21.02
Bra011851.1-P	Field mustard	cytosol, plastid	31.64	20.96
Bra029716.1-P	Field mustard	mitochondrion	26.55	20.68
Bra011855.1-P	Field mustard	plastid	17.09	18.88
Bra002939.1-P	Field mustard	cytosol	10.91	15.71
Bra006063.1-P	Field mustard	cytosol	5.82	8.65
Bra040994.1-P	Field mustard	cytosol	1.09	3.33

Protein Annotations

EnsemblPlants:Bra033852.1	EnsemblPlants:Bra033852.1-P	EnsemblPlantsGene:Bra033852	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box_dom	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
PANTHER:PTHR24414	PANTHER:PTHR24414:SF23	PFAM:PF01344	PFscan:PS50181	SEG:seg	SMART:SM00612
SUPFAM:SSF117281	UniParc:UPI0002548134	UniProt:M4EYG0	MapMan:35.1	:	:

Description

AT4G11770 (E=9e-063) | kelch repeat-containing F-box family protein

Coordinates

chrA05:+:14478366..14479193

Molecular Weight (calculated)

31834.5 Da

IEP (calculated)

9.707

GRAVY (calculated)

-0.228

Length

275 amino acids

Sequence
(BLAST)

001: MSTSLTKLST ATDSNESSPL LATARSFKEW LPLNQTYLPD DLLLNFFVRV SVLYYPILSL VSKRFRCLLA SRALYETRKL LNRTESCIYV CLQYGTEESR
101: WFTLCRRPTR VPRLPTPKPQ WFSPCFRPFR KEERKLGDNL LISVTTSNFS PCGNFLWNLS TVGSNIYMIG GYIGYKPTSR VFCMDCRSHI WQEAPSMLIA
201: RRFPRVSVLD GKIYVLESFK KYDTSNLMEV FDPKTQTWEH VPTPGAEIRG EYILKSGAIK GNLLFFWRQE HGVQA

Best Arabidopsis Sequence Match ( AT4G11770.1 )
(BLAST)

001: MMNGIKSSPC NMPYLPDDLL LNILGRVSRL YYPILSLVSK RFRSLVGSLE LYKIRTLLGR RTENCLYLSL RFSYGSNPRW FTLCRRPTRT PSPEPNLKSR
101: WFTSCFRPIL TNLTRATSKE EKKLSENLMV SIPTSNDCPL SGLTCNTIGS YIYMIGGYIN GVLSSRVFFL DCRSHTWHEA PSMQVARKSP LVNVLDGKIY
201: VVEGWRGSDY SNLIEIFDPK TQKWEHVPSP SAEMRGRYIS KGLVYEEKLY LFGDKNVVYK PKESRWDALG FDMNLWLVSY GSSCVIDNVC YMVFYKRLIW
301: YDSEVRYWRV LKGLEKLPKL RHRRSCIRMV DYGGKIAILW EKKVRVVGSD KKMIWCTEIA LERRSAHKIY GKIEWCDVVL TVPKSCSLLE FIAVTI

Arabidopsis Description

Putative F-box/kelch-repeat protein At4g11770 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0E4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.