Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78384 | Canola | cytosol | 27.24 | 48.61 |
| CDY16283 | Canola | cytosol | 27.24 | 47.95 |
| Bra006063.1-P | Field mustard | cytosol | 33.07 | 45.95 |
| CDY36006 | Canola | cytosol | 35.41 | 41.18 |
| AT5G38670.1 | Thale cress | cytosol, plastid | 43.58 | 38.49 |
| AT5G51250.1 | Thale cress | cytosol | 53.31 | 37.23 |
| AT5G38680.1 | Thale cress | cytosol | 46.3 | 33.33 |
| Bra036150.1-P | Field mustard | plastid | 45.91 | 31.81 |
| CDY29974 | Canola | plasma membrane | 40.47 | 31.52 |
| AT3G06570.1 | Thale cress | cytosol, plastid | 46.69 | 30.77 |
| AT3G08810.1 | Thale cress | nucleus | 40.86 | 30.61 |
| Bra029716.1-P | Field mustard | mitochondrion | 40.86 | 29.75 |
| AT4G25710.1 | Thale cress | cytosol | 44.36 | 29.23 |
| Bra000083.1-P | Field mustard | extracellular | 39.69 | 28.98 |
| CDY07711 | Canola | extracellular | 38.91 | 28.41 |
| AT4G11745.1 | Thale cress | cytosol | 31.13 | 28.17 |
| CDY27975 | Canola | nucleus, plastid | 36.19 | 28.01 |
| AT4G34170.1 | Thale cress | cytosol | 30.74 | 26.96 |
| Bra029718.1-P | Field mustard | nucleus | 41.25 | 26.7 |
| AT4G39550.1 | Thale cress | nucleus | 40.47 | 26.53 |
| AT4G39580.1 | Thale cress | cytosol | 38.52 | 26.4 |
| AT1G19930.1 | Thale cress | cytosol | 35.02 | 26.16 |
| AT4G39570.1 | Thale cress | nucleus, plastid | 39.3 | 25.57 |
| AT5G49000.2 | Thale cress | nucleus | 36.97 | 25.54 |
| AT5G48990.1 | Thale cress | cytosol, plastid | 36.97 | 25.54 |
| AT4G39600.2 | Thale cress | plastid | 37.35 | 25.4 |
| AT1G60570.1 | Thale cress | cytosol | 36.58 | 24.67 |
| AT4G11750.1 | Thale cress | cytosol | 35.02 | 23.32 |
| AT4G11770.1 | Thale cress | cytosol | 35.8 | 23.23 |
| AT4G33900.1 | Thale cress | cytosol | 34.24 | 23.22 |
| AT4G39590.1 | Thale cress | plastid | 35.8 | 22.89 |
| CDX81183 | Canola | cytosol | 21.01 | 22.78 |
| AT4G23580.1 | Thale cress | cytosol | 33.85 | 22.72 |
| CDY62432 | Canola | golgi | 38.52 | 22.65 |
| AT1G61540.1 | Thale cress | cytosol | 35.41 | 22.64 |
| AT4G39290.1 | Thale cress | cytosol | 31.52 | 22.19 |
| AT3G43710.1 | Thale cress | cytosol | 31.91 | 21.69 |
| AT5G48980.1 | Thale cress | nucleus | 33.46 | 21.55 |
| AT3G09750.1 | Thale cress | mitochondrion | 12.06 | 19.25 |
| AT4G39560.1 | Thale cress | plastid | 19.84 | 19.17 |
| AT2G20380.1 | Thale cress | cytosol | 24.9 | 18.39 |
| AT1G77880.1 | Thale cress | cytosol | 6.23 | 12.31 |
| AT4G05620.1 | Thale cress | plastid | 3.11 | 6.06 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:814875 | ProteinID:AEC05702.1 | ArrayExpress:AT2G03460 | EnsemblPlantsGene:AT2G03460 |
| RefSeq:AT2G03460 | TAIR:AT2G03460 | RefSeq:AT2G03460-TAIR-G | EnsemblPlants:AT2G03460.1 | TAIR:AT2G03460.1 | EMBL:AY501354 |
| Unigene:At.49326 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | InterPro:IPR015915 |
| InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | RefSeq:NP_178445.2 | PFAM:PF01344 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 |
| UniProt:Q6RF47 | SUPFAM:SSF117281 | UniParc:UPI0000237ADE | SEG:seg | : | : |
Description
Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q6RF47]
Coordinates
chr2:-:1043621..1044992
Molecular Weight (calculated)
28763.9 Da
IEP (calculated)
4.713
GRAVY (calculated)
-0.272
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSRSQAGS SYLESSSSVS ILDCRSHTWR EAPSLREGLC SVSSSVLDRK IYVAGSCLDG DSYTYKNSFE VFDTETQFWD PDTITCSKTE GDFYGCGTAC
101: IDGEFHVVPV GQKREAVAYN SKEGRWDMVG QQMDHYKFSA SCEIQNVLYS CTHGVFRWYD TNAMMWRDLK GLVGLPMFGS GANVKLADYG GKLTVLWEEE
201: LPSRGPDSGY KKMIRCAEIA LERRKSCEIW GIVEWFGDVL TEPVGYVVLE KVLDVTL
101: IDGEFHVVPV GQKREAVAYN SKEGRWDMVG QQMDHYKFSA SCEIQNVLYS CTHGVFRWYD TNAMMWRDLK GLVGLPMFGS GANVKLADYG GKLTVLWEEE
201: LPSRGPDSGY KKMIRCAEIA LERRKSCEIW GIVEWFGDVL TEPVGYVVLE KVLDVTL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.