Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G48980.1 | Thale cress | nucleus | 65.86 | 61.4 |
| AT4G39600.2 | Thale cress | plastid | 57.26 | 56.35 |
| AT2G20380.1 | Thale cress | cytosol | 50.54 | 54.02 |
| CDY51549 | Canola | plastid | 24.73 | 50.83 |
| CDY51548 | Canola | plastid | 44.62 | 48.97 |
| Bra018362.1-P | Field mustard | cytosol | 47.58 | 46.95 |
| CDY02008 | Canola | cytosol | 46.51 | 46.88 |
| CDY57171 | Canola | cytosol | 40.05 | 45.43 |
| AT5G49000.2 | Thale cress | nucleus | 44.89 | 44.89 |
| AT4G05620.1 | Thale cress | plastid | 15.86 | 44.7 |
| AT4G39550.1 | Thale cress | nucleus | 46.24 | 43.88 |
| AT3G08810.1 | Thale cress | nucleus | 38.44 | 41.69 |
| AT4G39580.1 | Thale cress | cytosol | 41.4 | 41.07 |
| AT5G38680.1 | Thale cress | cytosol | 38.98 | 40.62 |
| AT1G19930.1 | Thale cress | cytosol | 37.37 | 40.41 |
| AT5G38670.1 | Thale cress | cytosol, plastid | 31.45 | 40.21 |
| CDY66883 | Canola | extracellular | 22.31 | 39.52 |
| AT5G51250.1 | Thale cress | cytosol | 38.98 | 39.4 |
| AT4G25710.1 | Thale cress | cytosol | 41.13 | 39.23 |
| AT4G39560.1 | Thale cress | plastid | 27.96 | 39.1 |
| AT4G39570.1 | Thale cress | nucleus, plastid | 40.32 | 37.97 |
| AT2G03460.1 | Thale cress | plastid | 25.54 | 36.97 |
| AT4G39590.1 | Thale cress | plastid | 39.78 | 36.82 |
| AT1G60570.1 | Thale cress | cytosol | 37.63 | 36.75 |
| AT3G06570.1 | Thale cress | cytosol, plastid | 38.17 | 36.41 |
| AT4G11770.1 | Thale cress | cytosol | 37.9 | 35.61 |
| AT4G34170.1 | Thale cress | cytosol | 27.96 | 35.49 |
| AT1G77880.1 | Thale cress | cytosol | 12.1 | 34.62 |
| AT4G11750.1 | Thale cress | cytosol | 35.75 | 34.46 |
| AT3G09750.1 | Thale cress | mitochondrion | 14.52 | 33.54 |
| AT1G61540.1 | Thale cress | cytosol | 35.75 | 33.08 |
| AT4G33900.1 | Thale cress | cytosol | 32.8 | 32.19 |
| AT4G23580.1 | Thale cress | cytosol | 33.06 | 32.11 |
| AT4G39290.1 | Thale cress | cytosol | 31.45 | 32.05 |
| AT3G43710.1 | Thale cress | cytosol | 30.91 | 30.42 |
| AT4G11745.1 | Thale cress | cytosol | 22.31 | 29.23 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:834958 | ProteinID:AED95753.1 | ArrayExpress:AT5G48990 | EnsemblPlantsGene:AT5G48990 |
| RefSeq:AT5G48990 | TAIR:AT5G48990 | RefSeq:AT5G48990-TAIR-G | EnsemblPlants:AT5G48990.1 | TAIR:AT5G48990.1 | EMBL:AY072073 |
| EMBL:AY122957 | ProteinID:BAB10323.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0019538 | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | RefSeq:NP_199710.1 |
| PFAM:PF00646 | PFAM:PF01344 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50181 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 |
| UniProt:Q9FI71 | SMART:SM00256 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI000009D3A2 | SEG:seg |
Description
F-box/kelch-repeat protein At5g48990 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI71]
Coordinates
chr5:+:19862235..19863975
Molecular Weight (calculated)
42413.0 Da
IEP (calculated)
9.696
GRAVY (calculated)
-0.432
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPEKKRKK NQKSSPNPSL PEDLIVSILA RVSRSYYTNL SVVSKTFRSI LTSPELYKTR TLLGKPETFL YVCLRFPDEA NPRWLILYRK PNQTLTKKKK
101: KKEDSSVHLL APIPILNSPT VEWSSLVAVG SYLYAITADI KDSPCSNVWY LDCRTHTWLD SPRLRLAHIN SDFNGRTYFP GSSEKPDSLN CVEVYNTNTQ
201: TWNPVPPQKR KLKFGNMEGK IYIPPCQENH RKAVALNPKV LTWEAVGLGT NLDRGSFCMI GNIAYCYDPS GKFRWMNCNT AEGDWSRLEG LEGLPKFARY
301: STVKLAEYGG KLVVLWDKYV AASGYKEKMI WCAEISLEKR NSEEIWGKVE WFDAVLTVPK SYKFVCAKSA TV
101: KKEDSSVHLL APIPILNSPT VEWSSLVAVG SYLYAITADI KDSPCSNVWY LDCRTHTWLD SPRLRLAHIN SDFNGRTYFP GSSEKPDSLN CVEVYNTNTQ
201: TWNPVPPQKR KLKFGNMEGK IYIPPCQENH RKAVALNPKV LTWEAVGLGT NLDRGSFCMI GNIAYCYDPS GKFRWMNCNT AEGDWSRLEG LEGLPKFARY
301: STVKLAEYGG KLVVLWDKYV AASGYKEKMI WCAEISLEKR NSEEIWGKVE WFDAVLTVPK SYKFVCAKSA TV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.