Factsheet for AT4G33900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G23580.1	Thale cress	cytosol	74.67	73.89
AT4G34170.1	Thale cress	cytosol	47.23	61.09
CDX84184	Canola	cytosol, nucleus, vacuole	16.09	57.55
AT4G39290.1	Thale cress	cytosol	45.91	47.67
AT3G43710.1	Thale cress	cytosol	47.49	47.62
AT4G05620.1	Thale cress	plastid	14.25	40.91
AT4G39560.1	Thale cress	plastid	27.7	39.47
AT5G38680.1	Thale cress	cytosol	36.94	39.22
AT4G39580.1	Thale cress	cytosol	38.52	38.93
AT4G39550.1	Thale cress	nucleus	40.11	38.78
AT1G77880.1	Thale cress	cytosol	13.19	38.46
AT5G49000.2	Thale cress	nucleus	37.2	37.9
AT5G38670.1	Thale cress	cytosol, plastid	29.02	37.8
AT1G19930.1	Thale cress	cytosol	34.3	37.79
AT5G51250.1	Thale cress	cytosol	36.41	37.5
AT4G39600.2	Thale cress	plastid	36.68	36.77
AT4G11770.1	Thale cress	cytosol	37.2	35.61
AT4G39590.1	Thale cress	plastid	36.94	34.83
AT1G61540.1	Thale cress	cytosol	36.68	34.58
AT4G11750.1	Thale cress	cytosol	35.09	34.46
AT2G03460.1	Thale cress	plastid	23.22	34.24
AT4G39570.1	Thale cress	nucleus, plastid	35.62	34.18
AT1G60570.1	Thale cress	cytosol	34.04	33.86
AT3G08810.1	Thale cress	nucleus	30.61	33.82
AT4G25710.1	Thale cress	cytosol	34.04	33.08
AT5G48990.1	Thale cress	cytosol, plastid	32.19	32.8
AT5G48980.1	Thale cress	nucleus	34.04	32.33
AT3G09750.1	Thale cress	mitochondrion	13.46	31.68
AT2G20380.1	Thale cress	cytosol	27.97	30.46
AT3G06570.1	Thale cress	cytosol, plastid	30.87	30.0
AT4G11745.1	Thale cress	cytosol	22.16	29.58

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:829533	ProteinID:AEE86290.1	ArrayExpress:AT4G33900	EnsemblPlantsGene:AT4G33900
RefSeq:AT4G33900	TAIR:AT4G33900	RefSeq:AT4G33900-TAIR-G	EnsemblPlants:AT4G33900.1	TAIR:AT4G33900.1	Unigene:At.64716
ProteinID:CAA19872.1	ProteinID:CAB80107.1	EMBL:DQ446891	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
RefSeq:NP_567939.1	PFAM:PF00646	PFAM:PF01344	PFscan:PS50181	PANTHER:PTHR24414	PANTHER:PTHR24414:SF23
UniProt:Q1PE27	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0000162B85

Description

F-box/kelch-repeat protein At4g33900 [Source:UniProtKB/Swiss-Prot;Acc:Q1PE27]

Coordinates

chr4:-:16251572..16252711

Molecular Weight (calculated)

43188.6 Da

IEP (calculated)

7.409

GRAVY (calculated)

-0.208

Length

379 amino acids

Sequence
(BLAST)

001: MEYGEEPSIK RFLMLPDDLV FNCLARVSRL HYPTLSLVSK KFRFLLASKE LYQTRILLGG TESCLYVCVR LHTDSEQLHW FIIYQGPNSS KKVLVPISSP
101: NFTSAALPGF VVVGHEIYAI GGGSENKNAS INATGSKTYN ALSSVMVMDS RSHTWREAPS MRVARVFPSA CTLDGRIYVT GGCENLNSMN WMEIFDTKTQ
201: TWEFLQIPSE EVCKGSEYLS ISYQRTVYVG SREKDVTYKM HKGKWRGADI CLNHGWSLDP SSCCVIENVF YRCSLGDVRW YDLKKREWAA LKGLEGLPTF
301: TNYYRNFKSA DHCGKLAISW EEYVLVDDET KIWCAEIAIQ KRQNGEIWGT LEWFDNVFIS SGPNRHVDLL VNALTATVW

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.