Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86750 | Canola | cytosol | 18.13 | 61.95 |
| Bra040994.1-P | Field mustard | cytosol | 13.99 | 60.0 |
| AT4G11770.1 | Thale cress | cytosol | 60.36 | 58.84 |
| CDY13275 | Canola | mitochondrion | 30.57 | 56.73 |
| Bra040886.1-P | Field mustard | cytosol | 56.22 | 55.78 |
| AT4G11745.1 | Thale cress | cytosol | 37.31 | 50.7 |
| AT1G77880.1 | Thale cress | cytosol | 15.29 | 45.38 |
| AT4G05620.1 | Thale cress | plastid | 14.77 | 43.18 |
| AT5G38670.1 | Thale cress | cytosol, plastid | 31.61 | 41.92 |
| AT4G39550.1 | Thale cress | nucleus | 42.23 | 41.58 |
| AT4G34170.1 | Thale cress | cytosol | 31.09 | 40.96 |
| AT5G49000.2 | Thale cress | nucleus | 39.38 | 40.86 |
| AT1G19930.1 | Thale cress | cytosol | 36.27 | 40.7 |
| AT4G39580.1 | Thale cress | cytosol | 38.34 | 39.47 |
| AT4G39600.2 | Thale cress | plastid | 38.34 | 39.15 |
| AT4G39560.1 | Thale cress | plastid | 26.94 | 39.1 |
| AT5G38680.1 | Thale cress | cytosol | 35.75 | 38.66 |
| AT4G39570.1 | Thale cress | nucleus, plastid | 39.12 | 38.23 |
| AT5G51250.1 | Thale cress | cytosol | 36.01 | 37.77 |
| AT4G23580.1 | Thale cress | cytosol | 37.31 | 37.6 |
| AT1G61540.1 | Thale cress | cytosol | 38.6 | 37.06 |
| AT3G43710.1 | Thale cress | cytosol | 35.49 | 36.24 |
| AT4G25710.1 | Thale cress | cytosol | 36.53 | 36.15 |
| AT1G60570.1 | Thale cress | cytosol | 35.49 | 35.96 |
| AT4G39590.1 | Thale cress | plastid | 37.31 | 35.82 |
| AT5G48990.1 | Thale cress | cytosol, plastid | 34.46 | 35.75 |
| AT4G33900.1 | Thale cress | cytosol | 34.46 | 35.09 |
| AT2G03460.1 | Thale cress | plastid | 23.32 | 35.02 |
| AT4G39290.1 | Thale cress | cytosol | 32.9 | 34.79 |
| AT3G08810.1 | Thale cress | nucleus | 30.31 | 34.11 |
| AT3G06570.1 | Thale cress | cytosol, plastid | 33.42 | 33.08 |
| AT5G48980.1 | Thale cress | nucleus | 33.16 | 32.08 |
| AT2G20380.1 | Thale cress | cytosol | 27.72 | 30.75 |
| AT3G09750.1 | Thale cress | mitochondrion | 12.69 | 30.43 |
| CDY13276 | Canola | cytosol | 26.94 | 28.42 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | EntrezGene:826781 | ProteinID:AEE83045.1 | ArrayExpress:AT4G11750 | EnsemblPlantsGene:AT4G11750 |
| RefSeq:AT4G11750 | TAIR:AT4G11750 | RefSeq:AT4G11750-TAIR-G | EnsemblPlants:AT4G11750.1 | TAIR:AT4G11750.1 | Unigene:At.65363 |
| ProteinID:CAB39946.1 | ProteinID:CAB78218.1 | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | RefSeq:NP_192912.2 | PFAM:PF00646 |
| PFAM:PF01344 | PFscan:PS50181 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | UniProt:Q9T0E2 | SMART:SM00256 |
| SUPFAM:SSF117281 | UniParc:UPI0000196C1C | SEG:seg | : | : | : |
Description
Putative F-box/kelch-repeat protein At4g11750 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0E2]
Coordinates
chr4:-:7077390..7078550
Molecular Weight (calculated)
44791.8 Da
IEP (calculated)
9.885
GRAVY (calculated)
-0.257
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MMNPPVDLPY IPDDLLLNCL ARVSRLYYPI LSLVSKRFRS LVASLELYEI RKLLGHREKC LYLNLRFSSE SEPRWFTLCR RPTRSPNPNF NSGWFASCFI
101: PHTMKKEKKS SDNNLMVPVP TSNFITPPSE LTRITNGSNI YIVRVFTNGA FSSRFLFMDC RSHTLHEVPR MDKTKKKPFM IRVLDGKIYV IEGCKNPDYS
201: NLIERFDLKT QTWEHVPSPS AEIRGSYITG SLVYDGKLYL FGDKRVVYKP KENKWDVVGL EMPLRWTPSY ISCVVDNVIY SYGRSRVLMW YNTEERLWRY
301: LKGLKKLPKL PKDCTCVRLL GYSGKVVVLW EKNVGGGDPQ KKMIWCAEIA LERRSANKIY GKIEWCDVVL TLPRSCSLLN FAAVTV
101: PHTMKKEKKS SDNNLMVPVP TSNFITPPSE LTRITNGSNI YIVRVFTNGA FSSRFLFMDC RSHTLHEVPR MDKTKKKPFM IRVLDGKIYV IEGCKNPDYS
201: NLIERFDLKT QTWEHVPSPS AEIRGSYITG SLVYDGKLYL FGDKRVVYKP KENKWDVVGL EMPLRWTPSY ISCVVDNVIY SYGRSRVLMW YNTEERLWRY
301: LKGLKKLPKL PKDCTCVRLL GYSGKVVVLW EKNVGGGDPQ KKMIWCAEIA LERRSANKIY GKIEWCDVVL TLPRSCSLLN FAAVTV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.