Factsheet for AT1G60570.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G19930.1	Thale cress	cytosol	51.44	56.98
AT5G49000.2	Thale cress	nucleus	45.41	46.51
AT4G39550.1	Thale cress	nucleus	46.19	44.9
AT4G39560.1	Thale cress	plastid	30.45	43.61
AT5G38680.1	Thale cress	cytosol	39.63	42.3
AT5G51250.1	Thale cress	cytosol	40.42	41.85
AT3G08810.1	Thale cress	nucleus	36.75	40.82
AT4G34170.1	Thale cress	cytosol	31.23	40.61
AT4G39580.1	Thale cress	cytosol	39.9	40.53
AT4G39570.1	Thale cress	nucleus, plastid	41.47	40.0
AT4G39600.2	Thale cress	plastid	39.37	39.68
AT5G38670.1	Thale cress	cytosol, plastid	29.13	38.14
AT5G48990.1	Thale cress	cytosol, plastid	36.75	37.63
AT4G05620.1	Thale cress	plastid	12.86	37.12
AT4G11770.1	Thale cress	cytosol	38.58	37.12
AT3G06570.1	Thale cress	cytosol, plastid	37.8	36.92
AT4G25710.1	Thale cress	cytosol	37.8	36.92
AT2G03460.1	Thale cress	plastid	24.67	36.58
AT4G39590.1	Thale cress	plastid	38.32	36.32
AT4G11750.1	Thale cress	cytosol	35.96	35.49
AT3G09750.1	Thale cress	mitochondrion	14.96	35.4
AT1G77880.1	Thale cress	cytosol	12.07	35.38
AT1G61540.1	Thale cress	cytosol	36.48	34.58
AT4G11745.1	Thale cress	cytosol	25.72	34.51
AT4G23580.1	Thale cress	cytosol	34.65	34.46
AT4G33900.1	Thale cress	cytosol	33.86	34.04
AT3G43710.1	Thale cress	cytosol	33.6	33.86
AT5G48980.1	Thale cress	nucleus	34.38	32.83
AT2G20380.1	Thale cress	cytosol	29.66	32.47
AT4G39290.1	Thale cress	cytosol	30.71	32.05

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:842352	ProteinID:AAB71958.1	ProteinID:AEE33699.1	ArrayExpress:AT1G60570
EnsemblPlantsGene:AT1G60570	RefSeq:AT1G60570	TAIR:AT1G60570	RefSeq:AT1G60570-TAIR-G	EnsemblPlants:AT1G60570.1	TAIR:AT1G60570.1
Unigene:At.66064	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1	RefSeq:NP_176257.1	UniProt:O22698
PFAM:PF01344	PFAM:PF12937	PO:PO:0000005	PO:PO:0007611	PO:PO:0009046	PFscan:PS50181
PANTHER:PTHR24414	PANTHER:PTHR24414:SF23	SMART:SM00256	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI00000A90F3
SEG:seg	:	:	:	:	:

Description

Putative F-box/kelch-repeat protein At1g60570 [Source:UniProtKB/Swiss-Prot;Acc:O22698]

Coordinates

chr1:+:22311836..22312981

Molecular Weight (calculated)

43957.9 Da

IEP (calculated)

6.727

GRAVY (calculated)

-0.210

Length

381 amino acids

Sequence
(BLAST)

001: MSDDEEPPLK KNKLPVEEPT LIPSLPEELI LSILARVSRL SYRSLSLVCK RFHSLLTSGE IYRFRSLSGY TENCLYVCLR FSHTGRSHRW FMLREKNKSS
101: GYVLAPIPIS HSPSLHASSI VAVGSKIYKI GGVMDGSSVS ILDCWSHRWL EAPSMQMERD RPSANLIDGK IYVTGGCHRG SYNPSKWMEV FDLKTETWEP
201: VLCRSDRLTF ESYHERTNNL LVDGKLYIFW ADKGVVYNPK DDTWDSLEVP EMDMCLTLFY CCVIENVLYD FFYEELDIKW YDTKARTWRS LLNGMRELHK
301: FVRHASVTLA DYGGKMVMFW DKFVASGDGL GFHKTMMWCA MIALERSDSG EIWGKVEWFG PVLPNQIPLE YAFEYVGSVK V

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.