Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX98384 Canola plastid 46.83 42.09
AT4G11750.1 Thale cress cytosol 50.7 37.31
AT4G11770.1 Thale cress cytosol 51.76 37.12
AT2G03460.1 Thale cress plastid 28.17 31.13
AT5G38670.1 Thale cress cytosol, plastid 28.52 27.84
AT1G19930.1 Thale cress cytosol 33.45 27.62
AT4G39550.1 Thale cress nucleus 37.32 27.04
AT4G34170.1 Thale cress cytosol 27.82 26.96
AT4G39580.1 Thale cress cytosol 35.56 26.93
AT1G61540.1 Thale cress cytosol 36.97 26.12
AT5G49000.2 Thale cress nucleus 34.15 26.08
AT4G39590.1 Thale cress plastid 36.62 25.87
AT1G60570.1 Thale cress cytosol 34.51 25.72
AT5G51250.1 Thale cress cytosol 33.1 25.54
AT4G39600.2 Thale cress plastid 33.8 25.4
AT5G38680.1 Thale cress cytosol 31.69 25.21
AT4G25710.1 Thale cress cytosol 31.69 23.08
AT4G39570.1 Thale cress nucleus, plastid 32.04 23.04
AT3G43710.1 Thale cress cytosol 30.63 23.02
AT4G39290.1 Thale cress cytosol 29.58 23.01
AT5G48990.1 Thale cress cytosol, plastid 29.23 22.31
AT4G33900.1 Thale cress cytosol 29.58 22.16
AT3G06570.1 Thale cress cytosol, plastid 29.93 21.79
AT4G23580.1 Thale cress cytosol 29.23 21.67
AT3G08810.1 Thale cress nucleus 25.7 21.28
AT4G39560.1 Thale cress plastid 18.66 19.92
AT5G48980.1 Thale cress nucleus 27.11 19.3
AT2G20380.1 Thale cress cytosol 21.13 17.24
AT3G09750.1 Thale cress mitochondrion 7.39 13.04
AT1G77880.1 Thale cress cytosol 4.58 10.0
AT4G05620.1 Thale cress plastid 3.17 6.82
Protein Annotations
ArrayExpress:AT4G11745EnsemblPlants:AT4G11745.1EnsemblPlantsGene:AT4G11745EntrezGene:826780Gene3D:2.120.10.80GO:GO:0003674
GO:GO:0005488GO:GO:0005515InterPro:IPR015915InterPro:Kelch-typ_b-propellerPANTHER:PTHR24414PANTHER:PTHR24414:SF23
ProteinID:AEE83044.1RefSeq:AT4G11745RefSeq:AT4G11745-TAIR-GRefSeq:NP_849360.1SUPFAM:SSF117281TAIR:AT4G11745
TAIR:AT4G11745.1Unigene:At.65362UniParc:UPI0000196C1BUniProt:F4JPR8MapMan:35.1:
Description
Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JPR8]
Coordinates
chr4:-:7075826..7076680
Molecular Weight (calculated)
32573.6 Da
IEP (calculated)
7.437
GRAVY (calculated)
0.072
Length
284 amino acids
Sequence
(BLAST)
001: MVHFAIIDEK LLVSVPIRNY CPRFGLKNII TLGSNIYMIG EFSSTVFFMD CRSHTWHEGP GMQVAAKYNE VSVLDGKIYV VERCKVSVSS NLIQVFDPKT
101: QIWECVASPS TGIRGRFGLN SLAIDGKLYL FGDKNLVYKP KEKTWDVVGF EINFHWIPHD SFCVIDKVII YYYNRHSRLL EWYDPEGSSW GILNGLEELL
201: PKLPRVLVSR HVRLVDYGGK VAIFWEKEVR PLIGYNKITI WCAEIALERR NAQEIYGKIE WCNVVLTLPS SCSIDELNAV SIIV
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.