Factsheet for AT4G23580.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G33900.1	Thale cress	cytosol	73.89	74.67
AT4G34170.1	Thale cress	cytosol	47.78	62.46
CDX84184	Canola	cytosol, nucleus, vacuole	15.67	56.6
AT4G39290.1	Thale cress	cytosol	47.0	49.32
AT3G43710.1	Thale cress	cytosol	47.26	47.88
AT4G39580.1	Thale cress	cytosol	40.99	41.87
AT4G05620.1	Thale cress	plastid	14.36	41.67
AT5G51250.1	Thale cress	cytosol	39.95	41.58
AT5G38680.1	Thale cress	cytosol	38.38	41.18
AT1G19930.1	Thale cress	cytosol	36.81	40.99
AT1G77880.1	Thale cress	cytosol	13.84	40.77
AT4G39550.1	Thale cress	nucleus	41.25	40.31
AT5G49000.2	Thale cress	nucleus	38.9	40.05
AT5G38670.1	Thale cress	cytosol, plastid	30.29	39.86
AT4G39560.1	Thale cress	plastid	27.68	39.85
AT4G39600.2	Thale cress	plastid	38.12	38.62
AT4G39570.1	Thale cress	nucleus, plastid	39.16	37.97
AT4G11770.1	Thale cress	cytosol	38.9	37.63
AT4G11750.1	Thale cress	cytosol	37.6	37.31
AT1G61540.1	Thale cress	cytosol	37.6	35.82
AT4G39590.1	Thale cress	plastid	37.34	35.57
AT3G08810.1	Thale cress	nucleus	31.07	34.69
AT1G60570.1	Thale cress	cytosol	34.46	34.65
AT4G25710.1	Thale cress	cytosol	34.99	34.36
AT3G09750.1	Thale cress	mitochondrion	14.36	34.16
AT2G03460.1	Thale cress	plastid	22.72	33.85
AT3G06570.1	Thale cress	cytosol, plastid	33.94	33.33
AT5G48990.1	Thale cress	cytosol, plastid	32.11	33.06
AT2G20380.1	Thale cress	cytosol	29.5	32.47
AT5G48980.1	Thale cress	nucleus	33.68	32.33
AT4G11745.1	Thale cress	cytosol	21.67	29.23

Protein Annotations

Gene3D:2.120.10.80	MapMan:35.1	EntrezGene:828458	ProteinID:AEE84779.1	ArrayExpress:AT4G23580	EnsemblPlantsGene:AT4G23580
RefSeq:AT4G23580	TAIR:AT4G23580	RefSeq:AT4G23580-TAIR-G	EnsemblPlants:AT4G23580.1	TAIR:AT4G23580.1	Unigene:At.62424
ProteinID:CAA23024.1	ProteinID:CAB79313.1	EMBL:DQ056655	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_1
RefSeq:NP_194089.1	PFAM:PF00646	PFAM:PF01344	PFscan:PS50181	PANTHER:PTHR24414	PANTHER:PTHR24414:SF23
UniProt:Q9SUR8	SMART:SM00256	SMART:SM00612	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI00000A33DF
SEG:seg	:	:	:	:	:

Description

F-box/kelch-repeat protein At4g23580 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUR8]

Coordinates

chr4:-:12304246..12305397

Molecular Weight (calculated)

43601.3 Da

IEP (calculated)

8.051

GRAVY (calculated)

-0.233

Length

383 amino acids

Sequence
(BLAST)

001: MEYGEEPPIK RTRRSFLMLP DDLVLNCLAR ISRLHYPTLS LVSKTFRSLL ASTELYQTRI LLGRTESCLY ACLRLRTDSE LLHWFILCHR PHSSKNVLVP
101: ISSPSFTSPS LPGVVVVGPD VYAIGGGSKN KNVSIYATGS KTYNALSSVM IMNSRSHTWH EAPSMRVGRV FPSACTLDGR IYVTGGCDNL DTMNWMEIFD
201: TKTQTWEFLQ IPSEEICKGS EYLSVSYQGT VYVKSDEKDV TYKMHKGKWR EADICMNNGW SLSSSSSYCV VENVFYRYCE GEIRWYDLKN RAWTILKGLG
301: RLPSLPTSHS NVKLADHGGK MAISWEEYMF VDREKKIWCA EIAIEKHQNG EIWGTLEWFD NVFISKTPNG YVGLVHALTA TVW

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.