Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040994.1-P | Field mustard | cytosol | 12.84 | 52.22 |
| CDY13275 | Canola | mitochondrion | 28.69 | 50.48 |
| CDX98384 | Canola | plastid | 31.69 | 36.71 |
| CDX86750 | Canola | cytosol | 8.74 | 28.32 |
| CDY42631 | Canola | nucleus | 21.86 | 27.87 |
| CDY41985 | Canola | plastid | 19.95 | 27.44 |
| AT4G11750.1 | Thale cress | cytosol | 28.42 | 26.94 |
| CDY42633 | Canola | plastid | 19.4 | 25.82 |
| CDY44215 | Canola | plasma membrane | 19.13 | 24.48 |
| CDY53174 | Canola | cytosol | 21.58 | 24.46 |
| CDY16283 | Canola | cytosol | 9.56 | 23.97 |
| CDY19889 | Canola | cytosol | 22.68 | 23.71 |
| CDX78384 | Canola | cytosol | 9.29 | 23.61 |
| CDY42632 | Canola | cytosol | 23.22 | 22.19 |
| CDY41984 | Canola | cytosol | 23.22 | 22.19 |
| CDX72687 | Canola | cytosol | 20.22 | 22.09 |
| CDY42634 | Canola | cytosol, nucleus, plastid | 24.59 | 21.58 |
| CDY29938 | Canola | cytosol, peroxisome, plasma membrane | 20.22 | 21.57 |
| CDY41983 | Canola | cytosol | 15.03 | 21.57 |
| CDY53173 | Canola | nucleus, plastid | 21.86 | 21.56 |
| CDY41986 | Canola | cytosol | 24.04 | 21.36 |
| CDY63148 | Canola | cytosol | 19.13 | 21.15 |
| CDY09006 | Canola | nucleus | 17.49 | 20.98 |
| CDX99633 | Canola | mitochondrion | 22.4 | 20.92 |
| CDY01110 | Canola | cytosol | 19.95 | 20.68 |
| CDY00653 | Canola | cytosol | 18.58 | 20.54 |
| CDY36006 | Canola | cytosol | 12.3 | 20.36 |
| CDY15927 | Canola | cytosol | 21.58 | 20.26 |
| CDY16374 | Canola | cytosol, nucleus, peroxisome | 18.58 | 20.12 |
| CDX91543 | Canola | plastid | 18.85 | 20.12 |
| CDX75197 | Canola | cytosol | 20.22 | 20.0 |
| CDX72460 | Canola | extracellular | 21.58 | 19.95 |
| CDY68916 | Canola | nucleus | 16.67 | 19.93 |
| CDY49284 | Canola | extracellular, plasma membrane, vacuole | 19.95 | 19.78 |
| CDY02008 | Canola | cytosol | 19.95 | 19.78 |
| CDY35547 | Canola | cytosol | 13.39 | 19.44 |
| CDY29974 | Canola | plasma membrane | 16.67 | 18.48 |
| CDY57171 | Canola | cytosol | 16.39 | 18.29 |
| CDY51549 | Canola | plastid | 8.74 | 17.68 |
| CDY66883 | Canola | extracellular | 9.56 | 16.67 |
| CDY27975 | Canola | nucleus, plastid | 14.75 | 16.27 |
| CDY51548 | Canola | plastid | 15.03 | 16.22 |
| CDY07711 | Canola | extracellular | 14.48 | 15.06 |
| CDY49285 | Canola | golgi, plasma membrane | 21.58 | 13.5 |
| CDY62432 | Canola | golgi | 16.12 | 13.5 |
| CDX81183 | Canola | cytosol | 7.92 | 12.24 |
| CDX84184 | Canola | cytosol, nucleus, vacuole | 3.01 | 10.38 |
| CDY12136 | Canola | cytosol | 2.19 | 9.64 |
| CDY41987 | Canola | plastid | 17.76 | 9.09 |
| CDY42635 | Canola | nucleus | 17.49 | 8.56 |
Protein Annotations
| EnsemblPlants:CDY13276 | EnsemblPlantsGene:GSBRNA2T00071233001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | PFAM:PF01344 |
| ProteinID:CDY13276 | ProteinID:CDY13276.1 | SEG:seg | SUPFAM:SSF117281 | UniParc:UPI0004EF050E | UniProt:A0A078FJA2 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC09g23800DBnaC09g23800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJA2]
Coordinates
chrLK032033:-:593714..596701
Molecular Weight (calculated)
42386.5 Da
IEP (calculated)
9.203
GRAVY (calculated)
-0.063
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMKSKIELD SFLGIYRGTR SSEYTEGLVP RNIPRDSFLG IFRRLRSSEI PDENSEKQFV GTSDDWTIGK SIEISRGSSP SVYSEELSDE LVVLGVSSEF
101: RRKIPRDFRG KINFRGVISE DLFRRYLNSK LSSARVFFLD CRSYNWHEAP SMRTRRNCPN MSAIDGKIYV VGKWNVRPSN SIEIYDPKTQ IWESVPCPIT
201: EILGQKFTLN SLAIDGKLYL LADKCMVYRP VENKWDVGYW TLFLWTQFKF TCVICNVLSR VLKWLVNYER LRIAVLWVRS SGVFSREKVI WCAVIAVERR
301: NGQEIYGKIE WCDVVLTVPK SCCVLESIAI DVWSVILVVW LVVSGSQPQI PMWLVRLILL DLLQRG
101: RRKIPRDFRG KINFRGVISE DLFRRYLNSK LSSARVFFLD CRSYNWHEAP SMRTRRNCPN MSAIDGKIYV VGKWNVRPSN SIEIYDPKTQ IWESVPCPIT
201: EILGQKFTLN SLAIDGKLYL LADKCMVYRP VENKWDVGYW TLFLWTQFKF TCVICNVLSR VLKWLVNYER LRIAVLWVRS SGVFSREKVI WCAVIAVERR
301: NGQEIYGKIE WCDVVLTVPK SCCVLESIAI DVWSVILVVW LVVSGSQPQI PMWLVRLILL DLLQRG
001: MVHFAIIDEK LLVSVPIRNY CPRFGLKNII TLGSNIYMIG EFSSTVFFMD CRSHTWHEGP GMQVAAKYNE VSVLDGKIYV VERCKVSVSS NLIQVFDPKT
101: QIWECVASPS TGIRGRFGLN SLAIDGKLYL FGDKNLVYKP KEKTWDVVGF EINFHWIPHD SFCVIDKVII YYYNRHSRLL EWYDPEGSSW GILNGLEELL
201: PKLPRVLVSR HVRLVDYGGK VAIFWEKEVR PLIGYNKITI WCAEIALERR NAQEIYGKIE WCNVVLTLPS SCSIDELNAV SIIV
101: QIWECVASPS TGIRGRFGLN SLAIDGKLYL FGDKNLVYKP KEKTWDVVGF EINFHWIPHD SFCVIDKVII YYYNRHSRLL EWYDPEGSSW GILNGLEELL
201: PKLPRVLVSR HVRLVDYGGK VAIFWEKEVR PLIGYNKITI WCAEIALERR NAQEIYGKIE WCNVVLTLPS SCSIDELNAV SIIV
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JPR8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.