Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19889 | Canola | cytosol | 43.71 | 35.71 |
| CDY13275 | Canola | mitochondrion | 21.33 | 29.33 |
| CDY51549 | Canola | plastid | 17.83 | 28.18 |
| CDX98384 | Canola | plastid | 29.37 | 26.58 |
| CDX78384 | Canola | cytosol | 12.94 | 25.69 |
| CDY41983 | Canola | cytosol | 22.73 | 25.49 |
| CDY42631 | Canola | nucleus | 25.52 | 25.44 |
| CDX86750 | Canola | cytosol | 9.79 | 24.78 |
| CDY41985 | Canola | plastid | 22.38 | 24.06 |
| CDY42633 | Canola | plastid | 23.08 | 24.0 |
| CDY29938 | Canola | cytosol, peroxisome, plasma membrane | 28.32 | 23.62 |
| CDY16283 | Canola | cytosol | 11.54 | 22.6 |
| CDY35547 | Canola | cytosol | 19.58 | 22.22 |
| CDY41984 | Canola | cytosol | 29.72 | 22.19 |
| CDY09006 | Canola | nucleus | 23.43 | 21.97 |
| CDY68916 | Canola | nucleus | 23.08 | 21.57 |
| CDY63148 | Canola | cytosol | 24.83 | 21.45 |
| CDY49284 | Canola | extracellular, plasma membrane, vacuole | 27.62 | 21.41 |
| CDY02008 | Canola | cytosol | 27.27 | 21.14 |
| CDX75197 | Canola | cytosol | 27.27 | 21.08 |
| CDY01110 | Canola | cytosol | 25.87 | 20.96 |
| CDY66883 | Canola | extracellular | 15.38 | 20.95 |
| CDY07711 | Canola | extracellular | 25.52 | 20.74 |
| CDX72460 | Canola | extracellular | 28.67 | 20.71 |
| CDY00653 | Canola | cytosol | 23.78 | 20.54 |
| CDY53173 | Canola | nucleus, plastid | 26.57 | 20.49 |
| CDY42632 | Canola | cytosol | 27.27 | 20.37 |
| CDY36006 | Canola | cytosol | 15.73 | 20.36 |
| CDY53174 | Canola | cytosol | 22.73 | 20.12 |
| CDY57171 | Canola | cytosol | 23.08 | 20.12 |
| CDY16374 | Canola | cytosol, nucleus, peroxisome | 23.78 | 20.12 |
| CDX91543 | Canola | plastid | 23.78 | 19.83 |
| CDY42634 | Canola | cytosol, nucleus, plastid | 28.32 | 19.42 |
| CDY41986 | Canola | cytosol | 27.97 | 19.42 |
| CDY29974 | Canola | plasma membrane | 22.38 | 19.39 |
| CDY15927 | Canola | cytosol | 26.22 | 19.23 |
| CDX99633 | Canola | mitochondrion | 26.22 | 19.13 |
| CDY13276 | Canola | cytosol | 24.48 | 19.13 |
| CDX72687 | Canola | cytosol | 21.68 | 18.51 |
| CDY62432 | Canola | golgi | 26.57 | 17.39 |
| CDY51548 | Canola | plastid | 19.93 | 16.81 |
| CDY27975 | Canola | nucleus, plastid | 19.23 | 16.57 |
| CDX81183 | Canola | cytosol | 12.24 | 14.77 |
| CDY49285 | Canola | golgi, plasma membrane | 27.62 | 13.5 |
| CDX84184 | Canola | cytosol, nucleus, vacuole | 4.9 | 13.21 |
| AT1G77880.1 | Thale cress | cytosol | 5.59 | 12.31 |
| CDY41987 | Canola | plastid | 25.17 | 10.07 |
| CDY42635 | Canola | nucleus | 24.83 | 9.49 |
| CDY12136 | Canola | cytosol | 1.75 | 6.02 |
Protein Annotations
| EnsemblPlants:CDY44215 | EnsemblPlantsGene:GSBRNA2T00079707001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_1 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | PFAM:PF01344 |
| ProteinID:CDY44215 | ProteinID:CDY44215.1 | SUPFAM:SSF117281 | UniParc:UPI0004EC281C | UniProt:A0A078I021 | MapMan:35.1 |
Description
BnaC05g15720DBnaC05g15720D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I021]
Coordinates
chrLK032582:-:229055..230314
Molecular Weight (calculated)
33105.8 Da
IEP (calculated)
8.824
GRAVY (calculated)
-0.009
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHDAMKRQC DTLFVRFHLC GISNPDMSGK RFKDDIMWCR QMSPKLLVCS LIPAVFVVAA NCMRLRCHYE QCWLVVRIVR NRTRSGNLLV SFPAHNFGPD
101: ECRWISTIVG SDIYANHEPS TRVFIMDCRF HTWHEAPSML VAKKNPLVSV FDGKIFVVGR ITYRDFSNFL ESFDPETKIS FRMLEWYNYV GRSWISLKGI
201: MEKLPKLPKP YYGSLRLENC GGKIVLLWVQ NVCSICSTKE EKRIWCAEIA LEKRSIQEIC GKVKWCDVVL TVPKSCPLEQ LFVATI
101: ECRWISTIVG SDIYANHEPS TRVFIMDCRF HTWHEAPSML VAKKNPLVSV FDGKIFVVGR ITYRDFSNFL ESFDPETKIS FRMLEWYNYV GRSWISLKGI
201: MEKLPKLPKP YYGSLRLENC GGKIVLLWVQ NVCSICSTKE EKRIWCAEIA LEKRSIQEIC GKVKWCDVVL TVPKSCPLEQ LFVATI
001: MVHFAIIDEK LLVSVPIRNY CPRFGLKNII TLGSNIYMIG EFSSTVFFMD CRSHTWHEGP GMQVAAKYNE VSVLDGKIYV VERCKVSVSS NLIQVFDPKT
101: QIWECVASPS TGIRGRFGLN SLAIDGKLYL FGDKNLVYKP KEKTWDVVGF EINFHWIPHD SFCVIDKVII YYYNRHSRLL EWYDPEGSSW GILNGLEELL
201: PKLPRVLVSR HVRLVDYGGK VAIFWEKEVR PLIGYNKITI WCAEIALERR NAQEIYGKIE WCNVVLTLPS SCSIDELNAV SIIV
101: QIWECVASPS TGIRGRFGLN SLAIDGKLYL FGDKNLVYKP KEKTWDVVGF EINFHWIPHD SFCVIDKVII YYYNRHSRLL EWYDPEGSSW GILNGLEELL
201: PKLPRVLVSR HVRLVDYGGK VAIFWEKEVR PLIGYNKITI WCAEIALERR NAQEIYGKIE WCNVVLTLPS SCSIDELNAV SIIV
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JPR8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.