Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Bra029716.1-P | Field mustard | mitochondrion | 98.19 | 61.47 |
CDY27975 | Canola | nucleus, plastid | 85.97 | 57.23 |
Bra029718.1-P | Field mustard | nucleus | 96.83 | 53.9 |
CDX78384 | Canola | cytosol | 31.22 | 47.92 |
CDY29974 | Canola | plasma membrane | 70.14 | 46.97 |
CDY16283 | Canola | cytosol | 30.32 | 45.89 |
AT2G03460.1 | Thale cress | plastid | 41.18 | 35.41 |
CDY13275 | Canola | mitochondrion | 33.03 | 35.1 |
CDY07711 | Canola | extracellular | 55.2 | 34.66 |
CDY62432 | Canola | golgi | 55.66 | 28.15 |
CDY42631 | Canola | nucleus | 32.13 | 24.74 |
AT5G51250.1 | Thale cress | cytosol | 39.82 | 23.91 |
CDY51549 | Canola | plastid | 19.46 | 23.76 |
CDY00653 | Canola | cytosol | 34.39 | 22.96 |
AT3G06570.1 | Thale cress | cytosol, plastid | 39.82 | 22.56 |
CDX81183 | Canola | cytosol | 23.98 | 22.36 |
CDY42633 | Canola | plastid | 27.6 | 22.18 |
AT3G08810.1 | Thale cress | nucleus | 34.39 | 22.16 |
CDY41985 | Canola | plastid | 25.79 | 21.43 |
CDY09006 | Canola | nucleus | 29.41 | 21.31 |
CDY68916 | Canola | nucleus | 29.41 | 21.24 |
CDY53174 | Canola | cytosol | 29.41 | 20.12 |
CDX98384 | Canola | plastid | 27.15 | 18.99 |
CDY01110 | Canola | cytosol | 30.32 | 18.98 |
CDY16374 | Canola | cytosol, nucleus, peroxisome | 28.96 | 18.93 |
CDX91543 | Canola | plastid | 28.51 | 18.37 |
CDY53173 | Canola | nucleus, plastid | 30.77 | 18.33 |
CDY63148 | Canola | cytosol | 26.7 | 17.82 |
CDY66883 | Canola | extracellular | 16.74 | 17.62 |
CDY57171 | Canola | cytosol | 25.79 | 17.38 |
CDY51548 | Canola | plastid | 25.79 | 16.81 |
CDX75197 | Canola | cytosol | 28.05 | 16.76 |
CDY41984 | Canola | cytosol | 28.96 | 16.71 |
CDY42634 | Canola | cytosol, nucleus, plastid | 31.22 | 16.55 |
CDY49284 | Canola | extracellular, plasma membrane, vacuole | 27.6 | 16.53 |
CDY15927 | Canola | cytosol | 28.51 | 16.15 |
CDX99633 | Canola | mitochondrion | 28.51 | 16.07 |
CDY41986 | Canola | cytosol | 29.86 | 16.02 |
CDY42632 | Canola | cytosol | 27.6 | 15.93 |
CDX72687 | Canola | cytosol | 23.98 | 15.82 |
CDY44215 | Canola | plasma membrane | 20.36 | 15.73 |
CDY02008 | Canola | cytosol | 26.24 | 15.72 |
CDY41983 | Canola | cytosol | 18.1 | 15.69 |
CDX72460 | Canola | extracellular | 28.05 | 15.66 |
CDY29938 | Canola | cytosol, peroxisome, plasma membrane | 23.08 | 14.87 |
CDY19889 | Canola | cytosol | 21.72 | 13.71 |
CDY13276 | Canola | cytosol | 20.36 | 12.3 |
CDX86750 | Canola | cytosol | 5.88 | 11.5 |
CDY49285 | Canola | golgi, plasma membrane | 26.24 | 9.91 |
CDY35547 | Canola | cytosol | 9.95 | 8.73 |
CDX84184 | Canola | cytosol, nucleus, vacuole | 4.07 | 8.49 |
CDY41987 | Canola | plastid | 24.89 | 7.69 |
CDY42635 | Canola | nucleus | 25.79 | 7.62 |
CDY12136 | Canola | cytosol | 0.9 | 2.41 |
Protein Annotations
EnsemblPlants:CDY36006 | EnsemblPlantsGene:GSBRNA2T00059568001 | Gene3D:2.120.10.80 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_2 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | PFAM:PF07646 |
ProteinID:CDY36006 | ProteinID:CDY36006.1 | SUPFAM:SSF117281 | UniParc:UPI0004EE0B33 | UniProt:A0A078HDX7 | MapMan:35.1 |
Description
BnaA05g29440DBnaA05g29440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDX7]
Coordinates
chrLK032364:+:369035..369941
Molecular Weight (calculated)
25055.9 Da
IEP (calculated)
5.288
GRAVY (calculated)
-0.113
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVELTELSA RVLDRKIYVL GRRFHHLDGS WKSSFEVFNT NTQTWDLPSC GGFDSARINF LIDGKLHVVT LFDGVFAFDS KQCRWDLVEQ YPSTGTMCSG
101: SFCEVDNVLY SVSKDGALTW YDSDNTSWRD LNGLVGLPKL PSPLDGYGSY VKLTGYGGGK MMVFWNCNLG IHRPFQRDTI YCAEIALERR NGDCWGKLEW
201: FDSMLLVPLE TQFVKVLAVT L
101: SFCEVDNVLY SVSKDGALTW YDSDNTSWRD LNGLVGLPKL PSPLDGYGSY VKLTGYGGGK MMVFWNCNLG IHRPFQRDTI YCAEIALERR NGDCWGKLEW
201: FDSMLLVPLE TQFVKVLAVT L
001: MAPSRSQAGS SYLESSSSVS ILDCRSHTWR EAPSLREGLC SVSSSVLDRK IYVAGSCLDG DSYTYKNSFE VFDTETQFWD PDTITCSKTE GDFYGCGTAC
101: IDGEFHVVPV GQKREAVAYN SKEGRWDMVG QQMDHYKFSA SCEIQNVLYS CTHGVFRWYD TNAMMWRDLK GLVGLPMFGS GANVKLADYG GKLTVLWEEE
201: LPSRGPDSGY KKMIRCAEIA LERRKSCEIW GIVEWFGDVL TEPVGYVVLE KVLDVTL
101: IDGEFHVVPV GQKREAVAYN SKEGRWDMVG QQMDHYKFSA SCEIQNVLYS CTHGVFRWYD TNAMMWRDLK GLVGLPMFGS GANVKLADYG GKLTVLWEEE
201: LPSRGPDSGY KKMIRCAEIA LERRKSCEIW GIVEWFGDVL TEPVGYVVLE KVLDVTL
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q6RF47]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.