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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029716.1-P Field mustard mitochondrion 98.19 61.47
CDY27975 Canola nucleus, plastid 85.97 57.23
Bra029718.1-P Field mustard nucleus 96.83 53.9
CDX78384 Canola cytosol 31.22 47.92
CDY29974 Canola plasma membrane 70.14 46.97
CDY16283 Canola cytosol 30.32 45.89
AT2G03460.1 Thale cress plastid 41.18 35.41
CDY13275 Canola mitochondrion 33.03 35.1
CDY07711 Canola extracellular 55.2 34.66
CDY62432 Canola golgi 55.66 28.15
CDY42631 Canola nucleus 32.13 24.74
AT5G51250.1 Thale cress cytosol 39.82 23.91
CDY51549 Canola plastid 19.46 23.76
CDY00653 Canola cytosol 34.39 22.96
AT3G06570.1 Thale cress cytosol, plastid 39.82 22.56
CDX81183 Canola cytosol 23.98 22.36
CDY42633 Canola plastid 27.6 22.18
AT3G08810.1 Thale cress nucleus 34.39 22.16
CDY41985 Canola plastid 25.79 21.43
CDY09006 Canola nucleus 29.41 21.31
CDY68916 Canola nucleus 29.41 21.24
CDY53174 Canola cytosol 29.41 20.12
CDX98384 Canola plastid 27.15 18.99
CDY01110 Canola cytosol 30.32 18.98
CDY16374 Canola cytosol, nucleus, peroxisome 28.96 18.93
CDX91543 Canola plastid 28.51 18.37
CDY53173 Canola nucleus, plastid 30.77 18.33
CDY63148 Canola cytosol 26.7 17.82
CDY66883 Canola extracellular 16.74 17.62
CDY57171 Canola cytosol 25.79 17.38
CDY51548 Canola plastid 25.79 16.81
CDX75197 Canola cytosol 28.05 16.76
CDY41984 Canola cytosol 28.96 16.71
CDY42634 Canola cytosol, nucleus, plastid 31.22 16.55
CDY49284 Canola extracellular, plasma membrane, vacuole 27.6 16.53
CDY15927 Canola cytosol 28.51 16.15
CDX99633 Canola mitochondrion 28.51 16.07
CDY41986 Canola cytosol 29.86 16.02
CDY42632 Canola cytosol 27.6 15.93
CDX72687 Canola cytosol 23.98 15.82
CDY44215 Canola plasma membrane 20.36 15.73
CDY02008 Canola cytosol 26.24 15.72
CDY41983 Canola cytosol 18.1 15.69
CDX72460 Canola extracellular 28.05 15.66
CDY29938 Canola cytosol, peroxisome, plasma membrane 23.08 14.87
CDY19889 Canola cytosol 21.72 13.71
CDY13276 Canola cytosol 20.36 12.3
CDX86750 Canola cytosol 5.88 11.5
CDY49285 Canola golgi, plasma membrane 26.24 9.91
CDY35547 Canola cytosol 9.95 8.73
CDX84184 Canola cytosol, nucleus, vacuole 4.07 8.49
CDY41987 Canola plastid 24.89 7.69
CDY42635 Canola nucleus 25.79 7.62
CDY12136 Canola cytosol 0.9 2.41
Protein Annotations
EnsemblPlants:CDY36006EnsemblPlantsGene:GSBRNA2T00059568001Gene3D:2.120.10.80GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR015915InterPro:Kelch-typ_b-propellerInterPro:Kelch_2PANTHER:PTHR24414PANTHER:PTHR24414:SF23PFAM:PF07646
ProteinID:CDY36006ProteinID:CDY36006.1SUPFAM:SSF117281UniParc:UPI0004EE0B33UniProt:A0A078HDX7MapMan:35.1
Description
BnaA05g29440DBnaA05g29440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDX7]
Coordinates
chrLK032364:+:369035..369941
Molecular Weight (calculated)
25055.9 Da
IEP (calculated)
5.288
GRAVY (calculated)
-0.113
Length
221 amino acids
Sequence
(BLAST)
001: MPVELTELSA RVLDRKIYVL GRRFHHLDGS WKSSFEVFNT NTQTWDLPSC GGFDSARINF LIDGKLHVVT LFDGVFAFDS KQCRWDLVEQ YPSTGTMCSG
101: SFCEVDNVLY SVSKDGALTW YDSDNTSWRD LNGLVGLPKL PSPLDGYGSY VKLTGYGGGK MMVFWNCNLG IHRPFQRDTI YCAEIALERR NGDCWGKLEW
201: FDSMLLVPLE TQFVKVLAVT L
Best Arabidopsis Sequence Match ( AT2G03460.1 )
(BLAST)
001: MAPSRSQAGS SYLESSSSVS ILDCRSHTWR EAPSLREGLC SVSSSVLDRK IYVAGSCLDG DSYTYKNSFE VFDTETQFWD PDTITCSKTE GDFYGCGTAC
101: IDGEFHVVPV GQKREAVAYN SKEGRWDMVG QQMDHYKFSA SCEIQNVLYS CTHGVFRWYD TNAMMWRDLK GLVGLPMFGS GANVKLADYG GKLTVLWEEE
201: LPSRGPDSGY KKMIRCAEIA LERRKSCEIW GIVEWFGDVL TEPVGYVVLE KVLDVTL
Arabidopsis Description
Galactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q6RF47]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.