Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 1
- mitochondrion 1
- plasma membrane 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36006 | Canola | cytosol | 46.97 | 70.14 |
| CDY27975 | Canola | nucleus, plastid | 54.85 | 54.52 |
| CDY07711 | Canola | extracellular | 50.91 | 47.73 |
| CDX78384 | Canola | cytosol | 20.0 | 45.83 |
| CDX86750 | Canola | cytosol | 14.85 | 43.36 |
| CDY41985 | Canola | plastid | 34.85 | 43.23 |
| CDY16283 | Canola | cytosol | 19.09 | 43.15 |
| CDY42633 | Canola | plastid | 34.55 | 41.45 |
| AT2G03460.1 | Thale cress | plastid | 31.52 | 40.47 |
| CDY12136 | Canola | cytosol | 10.0 | 39.76 |
| CDY62432 | Canola | golgi | 52.12 | 39.36 |
| CDY68916 | Canola | nucleus | 35.15 | 37.91 |
| CDY09006 | Canola | nucleus | 34.85 | 37.7 |
| AT5G51250.1 | Thale cress | cytosol | 41.21 | 36.96 |
| CDX84184 | Canola | cytosol, nucleus, vacuole | 11.82 | 36.79 |
| AT3G08810.1 | Thale cress | nucleus | 37.88 | 36.44 |
| AT3G06570.1 | Thale cress | cytosol, plastid | 42.73 | 36.15 |
| CDY00653 | Canola | cytosol | 35.45 | 35.35 |
| CDY13275 | Canola | mitochondrion | 21.21 | 33.65 |
| CDY63148 | Canola | cytosol | 32.73 | 32.63 |
| CDY41983 | Canola | cytosol | 24.55 | 31.76 |
| CDY01110 | Canola | cytosol | 33.94 | 31.73 |
| CDY53174 | Canola | cytosol | 30.3 | 30.96 |
| CDY16374 | Canola | cytosol, nucleus, peroxisome | 31.52 | 30.77 |
| CDY53173 | Canola | nucleus, plastid | 33.94 | 30.19 |
| CDX91543 | Canola | plastid | 31.21 | 30.03 |
| CDY42631 | Canola | nucleus | 25.76 | 29.62 |
| CDY41984 | Canola | cytosol | 34.24 | 29.5 |
| CDY57171 | Canola | cytosol | 29.09 | 29.27 |
| CDY42632 | Canola | cytosol | 33.33 | 28.72 |
| CDX72687 | Canola | cytosol | 28.79 | 28.36 |
| CDX72460 | Canola | extracellular | 33.94 | 28.28 |
| CDY49284 | Canola | extracellular, plasma membrane, vacuole | 31.52 | 28.18 |
| CDY51548 | Canola | plastid | 28.79 | 28.02 |
| CDY42634 | Canola | cytosol, nucleus, plastid | 34.85 | 27.58 |
| CDY02008 | Canola | cytosol | 30.3 | 27.1 |
| CDX75197 | Canola | cytosol | 30.3 | 27.03 |
| CDY29938 | Canola | cytosol, peroxisome, plasma membrane | 27.58 | 26.53 |
| CDY41986 | Canola | cytosol | 32.73 | 26.21 |
| CDY51549 | Canola | plastid | 14.24 | 25.97 |
| CDY15927 | Canola | cytosol | 30.0 | 25.38 |
| CDX99633 | Canola | mitochondrion | 30.0 | 25.26 |
| CDY19889 | Canola | cytosol | 26.36 | 24.86 |
| CDY35547 | Canola | cytosol | 17.27 | 22.62 |
| CDY44215 | Canola | plasma membrane | 19.39 | 22.38 |
| CDX98384 | Canola | plastid | 21.21 | 22.15 |
| CDX81183 | Canola | cytosol | 15.76 | 21.94 |
| CDY66883 | Canola | extracellular | 13.64 | 21.43 |
| CDY49285 | Canola | golgi, plasma membrane | 31.21 | 17.61 |
| CDY13276 | Canola | cytosol | 18.48 | 16.67 |
| CDY42635 | Canola | nucleus | 30.91 | 13.64 |
| CDY41987 | Canola | plastid | 29.09 | 13.43 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078GXY8 | EnsemblPlants:CDY29974 | ProteinID:CDY29974 | ProteinID:CDY29974.1 |
| ncoils:Coil | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| EnsemblPlantsGene:GSBRNA2T00044492001 | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_2 | PFAM:PF00646 |
| PFAM:PF07646 | PFscan:PS50181 | PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | SMART:SM00256 | SUPFAM:SSF117281 |
| SUPFAM:SSF81383 | UniParc:UPI0004EE3B7C | SEG:seg | : | : | : |
Description
BnaC01g40340DBnaC01g40340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXY8]
Coordinates
chrLK032247:-:148810..150030
Molecular Weight (calculated)
37501.5 Da
IEP (calculated)
8.385
GRAVY (calculated)
-0.072
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLIKGDFV SRKRKTTTST TMAEKKNKPT PNTSDEVLLL PLPYDLVLMI VARVPVLYYR TLSLVSKSFR SMVASPELYK VRSLLGLTET CLYNLWLLSH
101: TWRKAPRMPV ELDELSARVL DGKIYVQGRY HQDGSWKKSF EVFDTNTQTW DLPCCGLDWE GIACCIIDGK LHAVTRFDGV FAFDSKKCRW ELVEKYPRTG
201: GDTMFSVSYC EVDSVLYSVS GDGALRWYDS DMAMWRDLKG LVGLPKLPSP LDGFGSFVKL TGYGGGKVMV FWNRNLISSQ WLKRDTIFCA EIALERRNGD
301: CWGKLEWCDS VLSVPVAVVT EFVKVLAVTL
101: TWRKAPRMPV ELDELSARVL DGKIYVQGRY HQDGSWKKSF EVFDTNTQTW DLPCCGLDWE GIACCIIDGK LHAVTRFDGV FAFDSKKCRW ELVEKYPRTG
201: GDTMFSVSYC EVDSVLYSVS GDGALRWYDS DMAMWRDLKG LVGLPKLPSP LDGFGSFVKL TGYGGGKVMV FWNRNLISSQ WLKRDTIFCA EIALERRNGD
301: CWGKLEWCDS VLSVPVAVVT EFVKVLAVTL
001: MQSQTNPNPS LPDDLILSCV ARVSRLYYPA LSLVSKSFRS LIASPELYKT RSLLDRTESC LYILYCTSNT WHEGPRLRVK LMSCTACVLD EKIYVSGRCK
101: DGDSMTFQVF DTNTQTWDPL SVPCSETKHD FHYKIVRFDG KLHLVSYKGV DAYNSKEGRW DLVTPSIEHN KYLYDCYRNI GNVWYTIVKG DISTSVWWYH
201: SEEREWRDLK GMVGLPKFPI DACLRMVDYG GKMAVLWDDY LPGRRKKMIW CAEIALERRG SLEIWGKVEW FAHVLTVPRQ YEFVKVLAAT L
101: DGDSMTFQVF DTNTQTWDPL SVPCSETKHD FHYKIVRFDG KLHLVSYKGV DAYNSKEGRW DLVTPSIEHN KYLYDCYRNI GNVWYTIVKG DISTSVWWYH
201: SEEREWRDLK GMVGLPKFPI DACLRMVDYG GKMAVLWDDY LPGRRKKMIW CAEIALERRG SLEIWGKVEW FAHVLTVPRQ YEFVKVLAAT L
Arabidopsis Description
F-box/kelch-repeat protein At5g38670 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFV5]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.