Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36006 | Canola | cytosol | 57.23 | 85.97 |
| Bra029716.1-P | Field mustard | mitochondrion | 74.7 | 70.25 |
| Bra029718.1-P | Field mustard | nucleus | 83.13 | 69.52 |
| CDY29974 | Canola | plasma membrane | 54.52 | 54.85 |
| CDY07711 | Canola | extracellular | 49.7 | 46.88 |
| CDX78384 | Canola | cytosol | 18.67 | 43.06 |
| CDY62432 | Canola | golgi | 54.52 | 41.42 |
| CDY16283 | Canola | cytosol | 18.07 | 41.1 |
| AT2G03460.1 | Thale cress | plastid | 28.01 | 36.19 |
| AT5G51250.1 | Thale cress | cytosol | 37.35 | 33.7 |
| CDY00653 | Canola | cytosol | 33.43 | 33.53 |
| CDY68916 | Canola | nucleus | 30.72 | 33.33 |
| AT3G08810.1 | Thale cress | nucleus | 34.34 | 33.24 |
| CDY13275 | Canola | mitochondrion | 20.78 | 33.17 |
| CDY09006 | Canola | nucleus | 30.42 | 33.11 |
| CDY41985 | Canola | plastid | 26.2 | 32.71 |
| CDY42633 | Canola | plastid | 26.81 | 32.36 |
| AT3G06570.1 | Thale cress | cytosol, plastid | 37.95 | 32.31 |
| CDY41983 | Canola | cytosol | 23.19 | 30.2 |
| CDX84184 | Canola | cytosol, nucleus, vacuole | 9.34 | 29.25 |
| CDY42631 | Canola | nucleus | 25.0 | 28.92 |
| CDY53173 | Canola | nucleus, plastid | 32.23 | 28.84 |
| CDX86750 | Canola | cytosol | 9.64 | 28.32 |
| CDY53174 | Canola | cytosol | 27.11 | 27.86 |
| CDY01110 | Canola | cytosol | 28.92 | 27.2 |
| CDY63148 | Canola | cytosol | 27.11 | 27.19 |
| CDX72687 | Canola | cytosol | 26.81 | 26.57 |
| CDY16374 | Canola | cytosol, nucleus, peroxisome | 26.81 | 26.33 |
| CDX91543 | Canola | plastid | 26.81 | 25.95 |
| CDY51549 | Canola | plastid | 13.86 | 25.41 |
| CDY15927 | Canola | cytosol | 29.82 | 25.38 |
| CDY41984 | Canola | cytosol | 29.22 | 25.33 |
| CDY12136 | Canola | cytosol | 6.33 | 25.3 |
| CDX99633 | Canola | mitochondrion | 29.82 | 25.26 |
| CDY57171 | Canola | cytosol | 24.7 | 25.0 |
| CDY42632 | Canola | cytosol | 28.61 | 24.8 |
| CDY42634 | Canola | cytosol, nucleus, plastid | 31.02 | 24.7 |
| CDY41986 | Canola | cytosol | 29.82 | 24.03 |
| CDY51548 | Canola | plastid | 24.4 | 23.89 |
| CDX75197 | Canola | cytosol | 26.51 | 23.78 |
| CDX72460 | Canola | extracellular | 28.31 | 23.74 |
| CDY49284 | Canola | extracellular, plasma membrane, vacuole | 25.6 | 23.04 |
| CDY02008 | Canola | cytosol | 25.3 | 22.76 |
| CDY29938 | Canola | cytosol, peroxisome, plasma membrane | 22.89 | 22.16 |
| CDY19889 | Canola | cytosol | 23.19 | 22.0 |
| CDY66883 | Canola | extracellular | 13.55 | 21.43 |
| CDX81183 | Canola | cytosol | 14.76 | 20.68 |
| CDY35547 | Canola | cytosol | 15.66 | 20.63 |
| CDX98384 | Canola | plastid | 19.58 | 20.57 |
| CDY44215 | Canola | plasma membrane | 16.57 | 19.23 |
| CDY13276 | Canola | cytosol | 16.27 | 14.75 |
| CDY49285 | Canola | golgi, plasma membrane | 24.7 | 14.02 |
| CDY41987 | Canola | plastid | 26.51 | 12.31 |
| CDY42635 | Canola | nucleus | 27.11 | 12.03 |
Protein Annotations
| Gene3D:2.120.10.80 | MapMan:35.1 | UniProt:A0A078GN31 | EnsemblPlants:CDY27975 | ProteinID:CDY27975 | ProteinID:CDY27975.1 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00038898001 |
| InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_2 | PFAM:PF00646 | PFAM:PF07646 |
| PANTHER:PTHR24414 | PANTHER:PTHR24414:SF23 | SUPFAM:SSF117281 | SUPFAM:SSF81383 | UniParc:UPI0004EE8FB8 | SEG:seg |
Description
BnaC05g43770DBnaC05g43770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GN31]
Coordinates
chrLK032213:-:58946..60118
Molecular Weight (calculated)
37826.4 Da
IEP (calculated)
8.814
GRAVY (calculated)
-0.273
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLIKGDSV STTRKRKTTT TSIREKKKKK LTSSSSLAYD LLVMIVARVP RSYYRTLSLV SKSFRSMVVS PELYKWYTLS KKSSGGGGYV LARVLMLDDD
101: SPRMMGLCYS DLVASPPRMP VELTELSARF LDRKIYVLGR RFHQDDGSWK SSFEVFNTNT QTWDLPSCGG FDSARINYLI DGKLHVVTLF DGLFAFDSKQ
201: CRWDLVEQYP STGIMCSGSF CEVDNVLYSV SEDGALTWYD SDKTSWRDLN GLVALPKLPS PLDGYGSYVK LTGYGGGKMM VFWNCNFGIH RPFQRDTIYC
301: AEIALERRNG DCWGKLEWFD TMLLVPVETQ FR
101: SPRMMGLCYS DLVASPPRMP VELTELSARF LDRKIYVLGR RFHQDDGSWK SSFEVFNTNT QTWDLPSCGG FDSARINYLI DGKLHVVTLF DGLFAFDSKQ
201: CRWDLVEQYP STGIMCSGSF CEVDNVLYSV SEDGALTWYD SDKTSWRDLN GLVALPKLPS PLDGYGSYVK LTGYGGGKMM VFWNCNFGIH RPFQRDTIYC
301: AEIALERRNG DCWGKLEWFD TMLLVPVETQ FR
001: MQSQTNPNPS LPDDLILSCV ARVSRLYYPA LSLVSKSFRS LIASPELYKT RSLLDRTESC LYILYCTSNT WHEGPRLRVK LMSCTACVLD EKIYVSGRCK
101: DGDSMTFQVF DTNTQTWDPL SVPCSETKHD FHYKIVRFDG KLHLVSYKGV DAYNSKEGRW DLVTPSIEHN KYLYDCYRNI GNVWYTIVKG DISTSVWWYH
201: SEEREWRDLK GMVGLPKFPI DACLRMVDYG GKMAVLWDDY LPGRRKKMIW CAEIALERRG SLEIWGKVEW FAHVLTVPRQ YEFVKVLAAT L
101: DGDSMTFQVF DTNTQTWDPL SVPCSETKHD FHYKIVRFDG KLHLVSYKGV DAYNSKEGRW DLVTPSIEHN KYLYDCYRNI GNVWYTIVKG DISTSVWWYH
201: SEEREWRDLK GMVGLPKFPI DACLRMVDYG GKMAVLWDDY LPGRRKKMIW CAEIALERRG SLEIWGKVEW FAHVLTVPRQ YEFVKVLAAT L
Arabidopsis Description
F-box/kelch-repeat protein At5g38670 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFV5]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.