CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039413.1-P	Field mustard	nucleus	100.0	4.1
GSMUA_AchrUn_...	Banana	nucleus	16.0	0.95
CDY27743	Canola	nucleus	20.0	0.82
CDY66905	Canola	nucleus	20.0	0.82
CDX80633	Canola	nucleus	12.0	0.81
CDX80627	Canola	nucleus	12.0	0.81
VIT_14s0060g01440.t01	Wine grape	nucleus	16.0	0.64
Os11t0672700-01	Rice	nucleus	12.0	0.51
TraesCS4B01G126600.1	Wheat	nucleus	12.0	0.49
TraesCS4D01G144400.2	Wheat	nucleus	12.0	0.48
TraesCS4A01G170100.1	Wheat	nucleus	12.0	0.48
EES10228	Sorghum	nucleus	12.0	0.48
Zm00001d048672_P001	Maize	nucleus	12.0	0.48
HORVU4Hr1G032190.1	Barley	nucleus	12.0	0.47
PGSC0003DMT400007294	Potato	nucleus	8.0	0.44
Solyc01g100280.2.1	Tomato	nucleus	12.0	0.43
CDY64039	Canola	nucleus	8.0	0.28
CDY12420	Canola	nucleus	8.0	0.24
CDY34859	Canola	nucleus	8.0	0.18
CDY34669	Canola	nucleus	8.0	0.17
CDY20972	Canola	nucleus	8.0	0.17
CDY20595	Canola	nucleus	8.0	0.17
CDY03955	Canola	nucleus	4.0	0.11
CDY15702	Canola	nucleus	4.0	0.1
CDY40476	Canola	nucleus	4.0	0.09
CDY12873	Canola	nucleus	4.0	0.09
CDY41637	Canola	nucleus	0.0	0.0
KRH42323	Soybean	cytosol	0.0	0.0
KRH42322	Soybean	cytosol, nucleus, plastid	0.0	0.0
CDX97959	Canola	nucleus	0.0	0.0
CDX89177	Canola	nucleus	0.0	0.0
CDX80626	Canola	golgi, mitochondrion	0.0	0.0

Protein Annotations

EnsemblPlants:CDY27742	EnsemblPlantsGene:GSBRNA2T00038544001	ProteinID:CDY27742	ProteinID:CDY27742.1	UniParc:UPI0004EE4FD5	UniProt:A0A078GRE8
MapMan:35.2	:	:	:	:	:

Description

BnaA05g31510DBnaA05g31510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRE8]

Coordinates

chrLK032209:-:216401..216478

Molecular Weight (calculated)

3106.9 Da

IEP (calculated)

10.886

GRAVY (calculated)

-0.552

Length

25 amino acids

Sequence
(BLAST)

1: MHKHNQVLWK QRRMLVGMSY FSDTL

Best Arabidopsis Sequence Match ( AT5G48090.1 )
(BLAST)

001: MKRDEDLTKS KFLITFLGKT SQTTPIEVEL PTDHLQDAQT PMEQDSIVEN MTDEENSSSS DDDSEANLQF DPVCSICDNG GYVLCCEGSC LRSFHPTIAD
101: GIETECESLG FTDKTQIQAL GTYLCNNCLY KQHQCYACGE LGSSDENFSQ QVFPCSASNC GHFYHPECVA RLLCADDQNK AEELQAKIAA RDCFACPLHT
201: CKLCNMSEDK NQYACILLYA DVAQQLITEN VYLGILLLNS TLTMRHCKEL GKVCFLTTAF LYIVSFHKLL NRAHEIDGLI LTPARDHLVF PDVSGQRRTR
301: SHGLAQFKED VLGMETDHCH HEGLFTGLGI TDPYEKPKKD ISCDEVEQRV MGIIDEVESS FNFDEFVKSR RPTHIKSYHS GNYFSKNITT GLVRTHVNAA
401: RAALKMFEEG RDRDARALFD PDSLLQLMKH KKKLEISPFL HGMRYTSFGR HFTNPEKLKE IVERLHWYVE NGDTVVDFCC GSNDFSCLMK EKLMETGKIC
501: FYKNLDLIPP KNNFNFEMRD WLSVKEEELP DGSQLIMGLN PPFGYKASLA NTFIKKALEF KPKILILIVP SETKRVDAID DYELIWEDRN LLAGMSFYLP
601: GSVDVNDKTI EQWNNITPPL YLWSRRDLSR SHKTTAVQQG HITQMHHFTY NGDSHHTEIP QGDDDTDMVQ DMEISPT

Arabidopsis Description

ELP1EDM2-like protein1 [Source:UniProtKB/TrEMBL;Acc:F4K064]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.