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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 1
  • golgi 1
  • plasma membrane 1
  • endoplasmic reticulum 1
  • vacuole 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74455 Canola cytosol, plasma membrane 81.33 13.47
CDY30240 Canola cytosol, extracellular, vacuole 84.0 12.21
CDX74457 Canola cytosol 80.0 11.58
CDY30242 Canola cytosol 78.67 11.35
CDX74454 Canola cytosol 57.33 9.6
CDY30244 Canola cytosol, plasma membrane, plastid 58.67 8.73
AT5G39480.1 Thale cress endoplasmic reticulum, extracellular, plasma membrane 56.0 7.39
AT5G39490.1 Thale cress extracellular, plasma membrane, vacuole 54.67 7.24
AT5G39460.1 Thale cress plasma membrane 53.33 7.01
GSMUA_Achr4P16390_001 Banana cytosol, nucleus, plasma membrane 40.0 5.64
KRH59601 Soybean endoplasmic reticulum, extracellular, plasma membrane 46.67 5.64
Zm00001d049737_P001 Maize cytosol 41.33 5.48
TraesCS7D01G320300.1 Wheat cytosol 38.67 5.26
TraesCS7A01G324600.1 Wheat cytosol 38.67 5.26
PGSC0003DMT400024153 Potato cytosol 44.0 5.25
Solyc04g076520.1.1 Tomato cytosol, nucleus, plasma membrane 44.0 5.25
GSMUA_Achr6P18710_001 Banana cytosol 38.67 5.23
Os08t0105100-01 Rice cytosol 38.67 5.21
KXG24173 Sorghum cytosol 38.67 5.16
KRH40957 Soybean cytosol, endoplasmic reticulum, vacuole 42.67 5.15
GSMUA_Achr8P32580_001 Banana endoplasmic reticulum 36.0 5.08
TraesCS7B01G225100.1 Wheat cytosol 36.0 4.9
VIT_07s0031g02420.t01 Wine grape endoplasmic reticulum, extracellular 40.0 4.81
KRH53935 Soybean endoplasmic reticulum 41.33 2.72
CDX99665 Canola extracellular 2.67 1.23
CDX74459 Canola extracellular, vacuole 2.67 0.57
CDY30238 Canola vacuole 2.67 0.54
CDY30245 Canola extracellular 0.0 0.0
CDY30239 Canola cytosol, extracellular, plastid 0.0 0.0
CDY15950 Canola extracellular 0.0 0.0
CDX74458 Canola cytosol, extracellular, plastid 0.0 0.0
AT5G39470.1 Thale cress extracellular 0.0 0.0
Protein Annotations
EnsemblPlants:CDY71334EnsemblPlantsGene:GSBRNA2T00014202001PANTHER:PTHR31370ProteinID:CDY71334ProteinID:CDY71334.1UniParc:UPI0004EDB345
UniProt:A0A078JX97MapMan:35.1::::
Description
BnaCnng72460DBnaCnng72460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JX97]
Coordinates
chrLK045429:+:796..1023
Molecular Weight (calculated)
8291.5 Da
IEP (calculated)
3.981
GRAVY (calculated)
-0.444
Length
75 amino acids
Sequence
(BLAST)
1: MIESPTGNAF YLLMLSYEES EKNNGKRLAG TKILEGNDTV HDANGTAMFV VDIHDTPSLE PFPFDADGED FEHSL
Best Arabidopsis Sequence Match ( AT5G39450.1 )
(BLAST)
001: MNQMRNGDLG SESFGTCLLL SLPEDVIAVI ARFVSPRDIC NLSLCCKSLC DVVDSERIWL VQCEVVKVLP LSEIIQWRIG ISSYKALCWF LGEVMKPLVG
101: VWVHQNPELG NVVYVMPGFL SVVGCRIIPQ EVGPLGIEEA RVMWSPVFEI ICGFDGSAKF FLHGRDGKVQ CCLHPGFVRG IEKSCNVLLL EVETRREKKL
201: CNEIDETVLL VETGVQLPFR KLPFSYRRNL LHIVTSTVGI PVPDLSSEKL FPTSKDDEAV LLERRTMLLK MHKFGGDWNH MNLEDECTNI PNQVDINKSW
301: KHLGFEGDIR NMDAENQTQR KSFSRYFRSG IKHILGRSSS SKNMSSSRSE TRPLNLQKFL NFGDSIGLSL KASNIKLSSY QGWPNMDETR YALYKLPIKD
401: PIANDEYAGL WGGTFGWPPG KCTEDKPGKA FFLLMLSYEE SQDGTERLLI GTKILEGTHY GMHPNGSAMF VIKIDSPSFE GFPFDTNGED FEHSYAGEGT
501: AKGYGFRYPG YKPGTLFVTS KGLLMFIWKA TKAVLTLQRL NLGELLRKGV CVSPLPPCLN FAYLIKCHTN VFAPERRRS
Arabidopsis Description
F-box protein At5g39450 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWD6]
SUBAcon: [extracellular,plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.