Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d015375_P001 | Maize | cytosol, mitochondrion, plastid | 93.84 | 93.84 |
| EER99694 | Sorghum | cytosol | 91.78 | 92.41 |
| Os07t0613200-00 | Rice | nucleus | 91.1 | 91.1 |
| GSMUA_Achr1P21900_001 | Banana | cytosol | 72.6 | 88.33 |
| GSMUA_Achr8P30580_001 | Banana | cytosol | 58.9 | 86.87 |
| VIT_14s0066g00560.t01 | Wine grape | cytosol | 82.88 | 82.88 |
| CDY23497 | Canola | cytosol, mitochondrion | 35.62 | 82.54 |
| Bra003951.1-P | Field mustard | cytosol | 82.19 | 82.19 |
| VIT_17s0000g09110.t01 | Wine grape | cytosol | 82.19 | 82.19 |
| Bra016354.1-P | Field mustard | cytosol | 82.19 | 81.63 |
| KRH69632 | Soybean | cytosol | 82.19 | 81.08 |
| VIT_00s0225g00020.t01 | Wine grape | cytosol | 80.82 | 80.82 |
| KRH74528 | Soybean | cytosol, endoplasmic reticulum, mitochondrion, nucleus | 81.51 | 80.41 |
| Bra024577.1-P | Field mustard | cytosol | 64.38 | 80.34 |
| KRH57125 | Soybean | cytosol | 80.14 | 80.14 |
| Solyc06g071720.1.1 | Tomato | nucleus | 80.82 | 79.73 |
| KRH54328 | Soybean | cytosol | 80.14 | 79.59 |
| KRH63615 | Soybean | endoplasmic reticulum, mitochondrion, nucleus | 80.14 | 79.59 |
| Bra007929.1-P | Field mustard | cytosol | 79.45 | 79.45 |
| KRH03232 | Soybean | cytosol | 79.45 | 79.45 |
| PGSC0003DMT400069410 | Potato | cytosol | 80.14 | 79.05 |
| Solyc03g112360.1.1 | Tomato | cytosol, nucleus, unclear | 80.14 | 79.05 |
| PGSC0003DMT400046820 | Potato | cytosol | 79.45 | 78.38 |
| GSMUA_Achr9P29110_001 | Banana | cytosol | 58.22 | 76.58 |
| Bra012370.1-P | Field mustard | cytosol, mitochondrion | 79.45 | 74.36 |
| AT1G12960.1 | Thale cress | nucleus | 51.37 | 72.12 |
| GSMUA_Achr6P06280_001 | Banana | nucleus | 70.55 | 48.58 |
| CDX80514 | Canola | plastid | 50.0 | 31.6 |
| VIT_12s0034g00430.t01 | Wine grape | cytosol, plastid | 1.37 | 1.87 |
| VIT_12s0034g00440.t01 | Wine grape | plastid | 1.37 | 1.79 |
| VIT_00s1889g00010.t01 | Wine grape | plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:17.1.2.1.28 | Gene3D:3.100.10.10 | EntrezGene:8076116 | UniProt:C5XW37 | EnsemblPlants:EES06343 | ProteinID:EES06343 |
| ProteinID:EES06343.1 | GO:GO:0002181 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 | GO:GO:0022625 | GO:GO:0030529 | InterPro:L18e/L15P_sf |
| HAMAP:MF_01341 | ProteinID:OQU84442.1 | PFAM:PF00828 | ScanProsite:PS00475 | PANTHER:PTHR11721 | PANTHER:PTHR11721:SF11 |
| InterPro:Ribosomal_L15 | InterPro:Ribosomal_L15_CS | InterPro:Ribosomal_L18e/L15P | EnsemblPlantsGene:SORBI_3004G055100 | SUPFAM:SSF52080 | unigene:Sbi.197 |
| UniParc:UPI0001A85ACE | RefSeq:XP_002453367.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:4455653..4458098
Molecular Weight (calculated)
16052.0 Da
IEP (calculated)
11.282
GRAVY (calculated)
-0.417
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MTTSLKKNRK KRGHVSAGHG RIGKHRKHPG GRGNAGGMHH HRILFDKYHP GYFGKVGMRY FHKLRNKFYC PSVNVERLWS MVPADKVAEA AGGDKAPLLD
101: VTQFGYFKVL GKGMLPPKPI VVKAKLISKV AEKKIKAAGG AVLLTA
101: VTQFGYFKVL GKGMLPPKPI VVKAKLISKV AEKKIKAAGG AVLLTA
001: MATALKKNRK KRGHVSAGHG RIGKHRKHPG GRGNAGGMHH HRILFDKYHP GYFGKVGMRY FHKLRNKFFC PIVNLDKLWS LVPEDVKAKS SKDNVPLIDV
101: TQHGFFKVLG KGHLPENKPF VVKAKLISKT AEKKIKEAGG AVVLTA
101: TQHGFFKVLG KGHLPENKPF VVKAKLISKT AEKKIKEAGG AVVLTA
Arabidopsis Description
RPL27AB60S ribosomal protein L27a-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LR33]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.