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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • cytosol 4
  • nucleus 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX68339 Canola mitochondrion 69.18 100.0
CDY23493 Canola cytosol 80.14 100.0
Bra007929.1-P Field mustard cytosol 96.58 96.58
Bra024577.1-P Field mustard cytosol 76.03 94.87
Bra016354.1-P Field mustard cytosol 95.21 94.56
CDY23496 Canola cytosol 73.97 90.0
GSMUA_Achr1P21900_001 Banana cytosol 73.29 89.17
GSMUA_Achr8P30580_001 Banana cytosol 59.59 87.88
VIT_17s0000g09110.t01 Wine grape cytosol 87.67 87.67
VIT_14s0066g00560.t01 Wine grape cytosol 86.99 86.99
Bra012370.1-P Field mustard cytosol, mitochondrion 92.47 86.54
KRH57125 Soybean cytosol 86.3 86.3
KRH03232 Soybean cytosol 85.62 85.62
KRH74528 Soybean cytosol, endoplasmic reticulum, mitochondrion, nucleus 86.3 85.14
KRH69632 Soybean cytosol 86.3 85.14
KRH63615 Soybean endoplasmic reticulum, mitochondrion, nucleus 85.62 85.03
KRH54328 Soybean cytosol 85.62 85.03
VIT_00s0225g00020.t01 Wine grape cytosol 84.93 84.93
Solyc03g112360.1.1 Tomato cytosol, nucleus, unclear 85.62 84.46
PGSC0003DMT400046820 Potato cytosol 85.62 84.46
Zm00001d022124_P001 Maize plasma membrane, plastid 83.56 84.14
EER99694 Sorghum cytosol 83.56 84.14
Solyc06g071720.1.1 Tomato nucleus 84.25 83.11
PGSC0003DMT400069410 Potato cytosol 83.56 82.43
EES06343 Sorghum cytosol 82.19 82.19
Os07t0613200-00 Rice nucleus 80.14 80.14
Os03t0408300-00 Rice nucleus 80.14 80.14
TraesCS2D01G178300.1 Wheat cytosol, golgi, unclear 79.45 80.0
Os02t0175600-01 Rice nucleus 78.77 79.86
Zm00001d015375_P001 Maize cytosol, mitochondrion, plastid 79.45 79.45
TraesCS2A01G170800.1 Wheat cytosol, nucleus 78.77 79.31
TraesCS2B01G197200.1 Wheat cytosol, golgi, unclear 77.4 77.93
GSMUA_Achr9P29110_001 Banana cytosol 58.22 76.58
GSMUA_Achr6P06280_001 Banana nucleus 71.23 49.06
VIT_12s0034g00430.t01 Wine grape cytosol, plastid 2.05 2.8
VIT_12s0034g00440.t01 Wine grape plastid 1.37 1.79
VIT_00s1889g00010.t01 Wine grape plastid 0.0 0.0
Protein Annotations
MapMan:17.1.2.1.28Gene3D:3.100.10.10EnsemblPlantsGene:Bra003951EnsemblPlants:Bra003951.1EnsemblPlants:Bra003951.1-PGO:GO:0003674
GO:GO:0003735GO:GO:0005198GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005840GO:GO:0006412GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0015934GO:GO:0019538GO:GO:0030529InterPro:L18e/L15P_sfUniProt:M4CIB8HAMAP:MF_01341
PFAM:PF00828ScanProsite:PS00475PANTHER:PTHR11721PANTHER:PTHR11721:SF10InterPro:Ribosomal_L15InterPro:Ribosomal_L15_CS
InterPro:Ribosomal_L18e/L15PSUPFAM:SSF52080UniParc:UPI0001BA840A:::
Description
AT1G70600 (E=1e-083) | structural constituent of ribosome
Coordinates
chrA07:+:15934448..15934888
Molecular Weight (calculated)
16514.4 Da
IEP (calculated)
11.315
GRAVY (calculated)
-0.640
Length
146 amino acids
Sequence
(BLAST)
001: MTTRFKKNRK KRGHVSAGHG RIGKHRKHPG GRGNAGGMHH HRILFDKYHP GYFGKVGMRY FHKLRNKFYC PIVNLDRLWS LVPEDVKAKS TKDKVPLIDV
101: TQHGFFKVLG KGHLPENKPF VVKAKLISKT AEKKIKEAGG AVVLTA
Best Arabidopsis Sequence Match ( AT1G70600.1 )
(BLAST)
001: MTTRFKKNRK KRGHVSAGHG RIGKHRKHPG GRGNAGGMHH HRILFDKYHP GYFGKVGMRY FHKLRNKFFC PIVNLDKLWS LVPEDVKAKS TKDNVPLIDV
101: TQHGFFKVLG KGHLPENKPF VVKAKLISKT AEKKIKEAGG AVVLTA
Arabidopsis Description
RPL27AC60S ribosomal protein L27a-3 [Source:UniProtKB/Swiss-Prot;Acc:P49637]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.