CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23320	Soybean	endoplasmic reticulum	76.71	66.01
GSMUA_Achr4P08720_001	Banana	cytosol	61.52	59.71
VIT_09s0002g02150.t01	Wine grape	nucleus	64.3	56.07
Solyc03g121580.2.1	Tomato	nucleus	64.56	55.43
EES01357	Sorghum	nucleus	61.27	53.42
Os01t0710000-01	Rice	nucleus	60.0	52.32
TraesCS3A01G250900.2	Wheat	cytosol	61.52	51.59
TraesCS3B01G280400.1	Wheat	nucleus	61.52	51.59
TraesCS3D01G251300.2	Wheat	nucleus	61.27	51.38
KRH12388	Soybean	nucleus	65.82	51.18
KRH37388	Soybean	nucleus	65.82	50.68
PGSC0003DMT400006393	Potato	nucleus	44.05	50.29
HORVU3Hr1G066930.1	Barley	plastid	61.77	47.94
Zm00001d043683_P001	Maize	cytosol	24.05	46.12
Zm00001d011705_P002	Maize	cytosol	60.51	45.96
GSMUA_Achr7P09120_001	Banana	nucleus	52.41	45.49
Zm00001d043682_P002	Maize	cytosol, plastid	58.48	43.67
GSMUA_Achr3P32330_001	Banana	cytosol	19.75	43.33
GSMUA_Achr7P24160_001	Banana	nucleus	24.56	40.42
Zm00001d052871_P001	Maize	cytosol	3.04	40.0
Zm00001d053451_P001	Maize	cytosol, nucleus, plastid	21.52	36.96
KRH29002	Soybean	nucleus	22.28	21.84
KRH24317	Soybean	nucleus	22.03	21.7
KRH58491	Soybean	nucleus	22.78	21.18
KRH42369	Soybean	nucleus	22.78	21.18
KRH58776	Soybean	nucleus	21.27	17.76
KRH42676	Soybean	nucleus	20.76	16.6
Zm00001d050047_P001	Maize	nucleus	11.39	16.3
KRH21268	Soybean	cytosol	12.91	16.04
KRH11018	Soybean	cytosol	11.9	15.26

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	UniProt:A0A0R0G415	EMBL:ACUP02009116	EnsemblPlantsGene:GLYMA_15G024000	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	EnsemblPlants:KRH10009
ProteinID:KRH10009	ProteinID:KRH10009.1	PFAM:PF00400	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294
PANTHER:PTHR22850	PANTHER:PTHR22850:SF85	SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI0006EDDA81	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:

Description

hypothetical protein

Coordinates

chr15:-:1917336..1921376

Molecular Weight (calculated)

44210.1 Da

IEP (calculated)

5.690

GRAVY (calculated)

-0.254

Length

395 amino acids

Sequence
(BLAST)

001: GRWGPLLEQA TFRNRHRLYL SEQTDGSVPN TLVKPRVAAE FNEEARSPFF KKYKTVLHPG EVNRIREFQQ NSKIVATHTD CPEVLIWDVE TQPNRHAVLG
101: ATTSRPDLVL TGHKDNAEFA LAMCPTEPFI LSGGDDSRLI LWDARLGSAP VVKQVDKAHN GYLHCVDWSP HDINFILTGS ADNTINMFDR RNLTSGGVGS
201: PIYKFEGHDA AVLCTVLMCT SVLGIVIECL LTYNFDLFQW SPDKPSVFGS TAEDGILNIW DHDKVGKTTD SASSKASNTP PGLFFRHAGH RDKVVDFHWN
301: ASDPWTIVSV SDDCESSGGG GTLQEIVKCR RYENILICII GFGHYCACNI TKAFFFFPIL YDADMADDRD IIYRPEEEVL TELDKFRSHI FGCNS

Best Arabidopsis Sequence Match ( AT2G19520.1 )
(BLAST)

001: MESDEAAAVS PQATTPSGGT GASGPKKRGR KPKTKEDSQT PSSQQQSDVK MKESGKKTQQ SPSVDEKYSQ WKGLVPILYD WLANHNLVWP SLSCRWGPQL
101: EQATYKNRQR LYLSEQTDGS VPNTLVIANC EVVKPRVAAA EHISQFNEEA RSPFVKKYKT IIHPGEVNRI RELPQNSKIV ATHTDSPDVL IWDVETQPNR
201: HAVLGAANSR PDLILTGHQD NAEFALAMCP TEPFVLSGGK DKSVVLWSIQ DHITTIGTDS KSSGSIIKQT GEGTDKNESP TVGPRGVYHG HEDTVEDVAF
301: SPTSAQEFCS VGDDSCLILW DARTGTNPVT KVEKAHDADL HCVDWNPHDD NLILTGSADN TVRLFDRRKL TANGVGSPIY KFEGHKAAVL CVQWSPDKSS
401: VFGSSAEDGL LNIWDYDRVS KKSDRAAKSP AGLFFQHAGH RDKVVDFHWN ASDPWTIVSV SDDCETTGGG GTLQIWRMSD LIYRPEEEVV AELEKFKSHV
501: MTCASKP

Arabidopsis Description

MSI4NFC4 [Source:UniProtKB/TrEMBL;Acc:A0A178VX04]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.