Factsheet for Os01t0164800-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
plasma membrane 1
plastid 1
extracellular 1
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os11t0146800-01
Os11t0615800-01
Os12t0143800-01
Os12t0497300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G01630.1	Os11t0146800-01	AT3G22880.1	15014444
AT5G01630.1	Os12t0143800-01	AT3G22880.1	15014444
AT5G01630.1	Os11t0146800-01	AT3G22880.1	16415210
AT5G01630.1	Os12t0143800-01	AT3G22880.1	16415210
AT5G01630.1	Os11t0615800-01	AT5G20850.1	15014444
AT5G01630.1	Os12t0497300-01	AT5G20850.1	15014444
AT5G01630.1	Os11t0615800-01	AT5G20850.1	16415210
AT5G01630.1	Os12t0497300-01	AT5G20850.1	16415210

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g050210.1.1	Tomato	cytosol	45.06	32.11
VIT_08s0058g00500.t01	Wine grape	cytosol	51.78	23.95
GSMUA_Achr5P28060_001	Banana	nucleus	53.75	14.8
CDY08306	Canola	nucleus	32.02	14.11
Zm00001d024953_P024	Maize	nucleus	71.94	11.8
TraesCS3A01G099300.4	Wheat	nucleus	70.75	11.31
TraesCS3D01G099600.1	Wheat	nucleus	71.54	11.12
TraesCS3B01G115500.3	Wheat	nucleus	70.75	11.01
HORVU3Hr1G017990.10	Barley	nucleus, plastid	71.15	10.77
Bra005674.1-P	Field mustard	nucleus	43.08	10.28
KRH17731	Soybean	mitochondrion	43.08	10.26
CDX80759	Canola	nucleus	43.08	9.85
CDY11187	Canola	nucleus	43.48	9.49
CDY64035	Canola	nucleus	39.53	9.45
AT5G01630.1	Thale cress	nucleus	42.29	9.26
AT4G00020.2	Thale cress	nucleus	41.9	8.93
Bra037060.1-P	Field mustard	nucleus	38.74	8.46
Os01t0164900-01	Rice	cytosol, mitochondrion	10.67	5.61
Solyc02g050200.1.1	Tomato	nucleus	0.0	0.0
HORVU3Hr1G015880.36	Barley	cytosol, mitochondrion, nucleus	0.0	0.0
TraesCS3A01G089200.3	Wheat	nucleus	0.0	0.0
TraesCS3B01G104500.1	Wheat	nucleus	0.0	0.0
TraesCS3D01G089500.2	Wheat	nucleus	0.0	0.0

Protein Annotations

MapMan:13.3.6.4.2	MapMan:14.3.2.1	Gene3D:2.40.50.140	ProteinID:BAF04019.1	ProteinID:BAS70559.1	InterPro:BRCA2
InterPro:BRCA2_OB_3	GO:GO:0000724	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003697
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006259	GO:GO:0006281	GO:GO:0006355	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:NA-bd_OB-fold	EnsemblPlantsGene:Os01g0164800	EnsemblPlants:Os01t0164800-01	PFAM:PF09104
PANTHER:PTHR11289	UniProt:Q0JQF9	SUPFAM:SSF50249	UniParc:UPI0000DD8998	:	:

Description

Breast cancer type 2 susceptibility protein domain containing protein. (Os01t0164800-01)

Coordinates

chr1:-:3343531..3346705

Molecular Weight (calculated)

28054.0 Da

IEP (calculated)

6.724

GRAVY (calculated)

-0.300

Length

253 amino acids

Sequence
(BLAST)

001: RDVTPFLKVR VTGLISKHSA TKSGCREGLI TIWNPTEKQK SDLVEGQIYS VTGLLASSYF TEVSYLSGRG SSTAWTPLAT AQTTNFEPFF TPRKAVELSH
101: FGEVPLTSEF DIAGVILYVG NVYLLNNQNR QWLFLTDGSK FISGEKYEEQ DDCLLAVSFS SKTTGEDSAF FNYALSGHIV GFSNLVKRDK DQMRHVWVAE
201: ATESSTYSLS HEIPKKSHLK EAATSAEKWA SNSHPMIQHL KERVLQIVGD SGG

Best Arabidopsis Sequence Match ( AT4G00020.1 )
(BLAST)

0001: MSTWQLFPDS SGDGFRWEVA GRILQSVSDS TPTKALESTA PLPSMADLLL QGCSKLIARE EAMPGEIPMF RTGLGKSVVL KESSIAKAKS ILAEKVTYSD
0101: LRNTNCSIPQ MRQVDTAETL PMFRTASGKS VPLKESSIAK AMSILGSDKI IDSDNVLPRE SGFGVSNSLF QTASNKKVNV SSAGLARAKA LLGLEEDDLN
0201: GFNHVNQSSS SSQQHGWSGL KTHEEFDATV VKHHSGTPGQ YEDYVSGKRS EVLNPSLKVP PTKFQTAGGK SLSVSAEALK RARNLLGDPE LGSFFDDVAG
0301: GDQFFTPEKD ERLSDIAINN GSANRGYIAH EEKTSNKHTP NSFVSPLWSS SKQFSSVNLE NLASGGNLIK KFDAAVDETD CALNATHGLS NNRSLASDMA
0401: VNNSKVNGFI PRGRQPGRPA DQPLVDITNR RDTAYAYNKQ DSTQKKRLGK TVSVSPFKRP RISSFKTPSK KHALQASSGL SVVSCDTLTS KKVLSTRYPE
0501: KSPRVYIKDF FGMHPTATTR MDYVPDHVRR IKSSNADKYV FCDESSSNKV GAETFLQMLA ESGASLQHAS RKWVTNHYRW IVWKLACYDI YYPAKCRGNF
0601: LTITNVLEEL KYRYEREVNH GHCSAIKRIL SGDAPASSMM VLCISAINPK TDNDSQEAHC SDSCSNVKVE LTDGWYSMNA ALDVVLTKQL NAGKLFVGQK
0701: LRILGAGLSG WATPTSPLEA VISSTICLLL NINGTYRAHW ADRLGFCKEI GVPLALNCIK CNGGPVPKTL AGIKRIYPIL YKERLGEKKS IVRSERIESR
0801: IIQLHNQRRS ALVEGIMCEY QRGINGVHSQ NDTDSEEGAK IFKLLETAAE PEFLMAEMSP EQLRSFTTYK AKFEAAQQMR KEKSVAETLE DAGLGERNVT
0901: PFMRIRLVGL TSLSYEGEHN PKEGIVTIWD PTERQRTELT EGKIYMMKGL VPINSDSEIL YLHARGSSSR WQPLSPKDSE NFQPFFNPRK PISLSNLGEI
1001: PLSSEFDIAA YVVYVGNAYT DVLQKKQWVF VTDGSAQHSG EISNSLLAIS FSTSFMDDSS VSHISHNLVG SVVGFCNLIK RAKDVTNEIW VAEAAENSVY
1101: FINAEAAYSS HLKTSSAHIQ TWAKLSSSKS VIHELRQRVL SIIGACKSPS C

Arabidopsis Description

MEE43BREAST CANCER 2 like 2A [Source:UniProtKB/TrEMBL;Acc:F4JGU5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.