Factsheet for Os02t0550700-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0596900-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G60500.1	Os03t0596900-01	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045898_P001	Maize	cytosol, extracellular	34.68	89.54
TraesCS7A01G457300.1	Wheat	cytosol	74.68	73.75
HORVU6Hr1G027570.6	Barley	cytosol	82.53	72.77
TraesCS6D01G130400.3	Wheat	cytosol	82.28	72.54
TraesCS6A01G141100.2	Wheat	cytosol	82.28	72.54
TraesCS6B01G169200.2	Wheat	cytosol	82.03	72.32
HORVU7Hr1G105370.12	Barley	nucleus	82.03	72.32
TraesCS7D01G445900.2	Wheat	nucleus	81.77	72.26
TraesCS7B01G358800.3	Wheat	nucleus	81.52	71.88
KXG30375	Sorghum	nucleus	79.49	69.93
Zm00001d016770_P002	Maize	nucleus	77.72	68.83
GSMUA_Achr8P16380_001	Banana	cytosol	59.49	64.21
AT3G12990.1	Thale cress	cytosol	49.11	63.19
Zm00001d036997_P001	Maize	cytosol	42.53	62.45
Zm00001d002336_P001	Maize	cytosol	27.34	61.36
CDY70752	Canola	cytosol	52.91	59.38
Zm00001d042612_P001	Maize	plastid	37.47	58.73
GSMUA_Achr6P25490_001	Banana	cytosol	55.7	54.59
CDX67830	Canola	nucleus	56.71	54.5
Bra003416.1-P	Field mustard	nucleus	56.71	54.5
CDX98419	Canola	nucleus	56.71	54.5
Solyc05g047420.2.1	Tomato	nucleus	58.23	51.92
Bra007540.1-P	Field mustard	nucleus	56.96	51.61
CDY41161	Canola	cytosol	55.95	50.69
AT3G60500.1	Thale cress	cytosol	56.2	50.68
CDX71803	Canola	nucleus	55.7	50.0
VIT_18s0072g00880.t01	Wine grape	nucleus	45.82	47.88
Zm00001d033842_P001	Maize	cytosol	36.46	45.86
KRH77682	Soybean	cytosol	50.13	45.31
KRH27808	Soybean	nucleus	50.13	42.13
Os12t0403800-02	Rice	cytosol	22.53	31.34
Os11t0311300-03	Rice	cytosol	20.25	26.14

Protein Annotations

MapMan:16.8.1.1.5	Gene3D:3.30.230.70	EntrezGene:4329627	ProteinID:BAD33267.1	ProteinID:BAF09010.1	ProteinID:BAS79162.1
InterPro:ExoRNase_PH_dom1	InterPro:ExoRNase_PH_dom2	InterPro:ExoRNase_PH_dom2_sf	GO:GO:0000176	GO:GO:0000177	GO:GO:0000178
GO:GO:0000467	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006396
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0017091	GO:GO:0034427
GO:GO:0034473	GO:GO:0034475	GO:GO:0034476	GO:GO:0043928	GO:GO:0071028	GO:GO:0071035
GO:GO:0071038	GO:GO:0071042	InterPro:IPR027408	EnsemblPlantsGene:Os02g0550700	EnsemblPlants:Os02t0550700-01	PFAM:PF01138
PFAM:PF03725	InterPro:PNPase/RNase_PH_dom_sf	PANTHER:PTHR11097	PANTHER:PTHR11097:SF21	UniProt:Q69T30	InterPro:Ribosomal_S5_D2-typ_fold
InterPro:Rrp45	SUPFAM:SSF54211	SUPFAM:SSF55666	UniParc:UPI0000358B1F	RefSeq:XP_015622945.1	RefSeq:XP_015622946.1
SEG:seg	:	:	:	:	:

Description

ECERI1FERUM7, ECERI1FERUM 7Similar to Nucleolar autoantigen-like protein. (Os02t0550700-01)

Coordinates

chr2:-:20728337..20731638

Molecular Weight (calculated)

43221.2 Da

IEP (calculated)

6.032

GRAVY (calculated)

-0.525

Length

395 amino acids

Sequence
(BLAST)

001: MDHHQRWHPT VNEREFIERA LQSDLRVDGR RPFDFRRLKI LFGREDGSAE VQLGDTRVMG YATAQLVQPY KDRPNEGTLA IFTEFSPMAD PAFEPGRPGE
101: SAIELGRVVD RGLRESRAVD MESLCVVAGK HVWSVRVDLH ILDNGGNLID AANIAALAAL STFRRPECTV GGEDGQQVTV HDPEVRDPLP LTIHHLPIAV
201: TFAYFGEGNI MVIDPTYKEE AVMGGRMTAT INSNGDVCSI QKAGGEGVMS SVIMQCLRIA SVKAADITSK IKNEVNSYTS AKALQKVKRL PASALKKDNA
301: PDVAMKESSD GALETQSTKP SSDGQQINKE PPSVVEDNKQ EDVEPMLSEC NPEPQSESRL TAGGSDETQE AISPKSLKDA VKPKHKIKKK QHSKS

Best Arabidopsis Sequence Match ( AT3G60500.1 )
(BLAST)

001: MEGRLANMWR LTVNESKFVE TALQSELRVD GRGLYDYRKL TIKFGKEYGS SEVQLGQTHV MGFVTAQLVQ PYKDRPNEGS LSIFTEFSPM ADPSFEPGRP
101: GESAVELGRI IDRGLRESRA VDTESLCVLA GKMVWSVRID LHILDNGGNL VDAANIAALA ALMTFRRPDC TVGGENGQEV IIHPLEEREP LPLIIHHLPI
201: AFTFGFFNKG NIVVMDPTYV EEAVMCGRMT VTVNANGDIC AIQKPGEEGV NQSVILHCLR LASSRAAATT KIIREEVEAY NCERSLQKVK RHPTLAKSEV
301: SGPTVAVKEE HRKSSDQERA AEISREHVER LKLSTEEVRS SKEEEAANFK GGPSNWDPYS EAMDVDSLKV SLASRGDPVT KSSSTKKMNG SGNAQKVGVE
401: ISVEEVTGEL GKKDTKHKDG EMTLKDAVKP KKKRKNKS

Arabidopsis Description

RRP45BExosome complex component RRP45B [Source:UniProtKB/Swiss-Prot;Acc:Q9M209]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.